Bsoft program

bmaxpow

Usage: bmaxpow [options] input.star [input.star]

Finds orientations of particle images based on maximizing reciprocal space reconstruction power.

Actions:

-all	Reset selection to all particles before other selections (default not).
-center	Center particles before determining orientation (default not).
-symmetry C5	Point group symmetry to find orientations.

Parameters:

-verbose 7	Verbosity of output.
-select 14	Selection number of particles to process (default all selected).
-size 100,120,90	Size of reconstruction (default from images).
-angles 8.8,2.5,5.2	Step size for alpha, theta and phi, one value sets all (default 45 degrees).
-resolution 10,500	Resolution limits for finding centers (angstrom, default 20,1000).
-pad 3	Image padding factor (default 0, no padding).
-CTF flip	Apply CTF correction to images before reconstruction (default not).
-wiener 0.15	Wiener factor for CTF correction (default 0.2).

Input:

-reference file.pif	Centering reference file (turns on centering).
-mask mask.mrc	Real space 2D mask to be applied to particles.

Output:

-output file.star	Output parameter file.
-ppx	Write temporary particle parameter files to directory "ppx".

Bsoft version 2.0.7-20200917 (64 bit)

Generated by bdoc.pl on Mon Oct 26 08:20:11 2020

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