| -all | Reset selection to all components before other selections. |
| -verbose 7 | Verbosity of output. |
| -datatype u | Force writing of a new image data type. |
| -origin 0,0,0 | Origin placement within image (default 0,0,0). |
| -size 10,10,10 | Map size, input map size otherwise (voxels). |
| -sampling 1 | Sampling (default 1 angstrom/voxel). |
| -sigma 3.5 | Density decay around a component (default 10). |
| -parameters param.star | Input parameter file. |
| -output model.star | New model file. |
| -map density.map | New map file. |