Bsoft program

bmodmask

Usage: bmodmask [options] in1.star [in2.star...]

Generates a mask from a model if an output image is specified.

Actions:

-type hullMask type: model, hull, shell, level.
-invertInvert the mask after creation.
-project 2.5,D3Projected masks at the angular step size and symmetry.

Parameters:

-verbose 7Verbose output.
-componentradius 8.4Set display radius for all components.
-linkradius 5.1Set display radius for all links.

Parameters for mask creation:

-datatype uForce writing of a new data type (default float).
-size 100,120,80Mask size (default from model).
-sampling 1.5,1.5,1.5Sampling (A/pixel; a single value can be given).
-origin 0.8,-10,15.7Set the origin for the mask.
-edge 1.5Edge width for model mask (default 1 angstrom).
-width 34.8Shell mask width (default 1 angstrom).
-curvedFlag to indicate curved hull or shell surface (default not).
-fastUse fast but less comprehensive algorithm for shell and hull masks.
-smooth 2Edge smoothing in pixels (default 0).

Input:

-parameters param.starInput parameter file.

Output:

-output file.starOutput model file.
-mask mask.mapOutput mask image.

Bsoft version 2.0.7-20200917 (64 bit)


Generated by bdoc.pl on Mon Oct 26 08:20:11 2020


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