returning the number of the input file with the best value. | |
-reconstructions | Operate on reconstruction parameters rather than micrographs. |
-all | Reset selection to all particles before other selections (default not). |
-setasu D3 | Set the views to the asymmetric unit. |
-select var | Select based on: fom (FOM), err (error between first 2), |
rmsd (RMSD between first 2), msd or var (variance). | |
-merge | Merge multiple files, keeping selected particle parameters. |
-divide 3 | Divide the project into a number of subsets of fields. |
-Compare | Compare selections. |
-Statistics | Do selection statistics. |
-verbose 7 | Verbosity of output. |
-symmetry D6 | Symmetry: Point group identifier. |
-fom 0.2,2,1 | FOM cutoff, index and flag to weigh with defocus (default 0,0,0). |
-Origin 1.2 | Origin deviation to accept (default 10 pixels). |
-View 13.5 | View deviation to accept (default 180 degrees). |
-Angle 5.8 | Rotation angle deviation to accept (default 180 degrees). |
-Magnification 0.03 | Magnification deviation to accept (default 2). |
-template input.star | Template parameter file to merge in data blocks from other input files. |
-output file.star | Output parameter file. |