# Input parameters for test of bhandedness program
# Murine polyomavirus data from 5122 and 5123 micrographs (tilt pair)
 

data_

_map.3D_reconstruction.file_name polyoma_t7d.pif
_radius_min 0
_radius_max 69
_resolution_low 135
_resolution_high 27
 
 

data_

_micrograph_particle.file_name poly_5122.pif
_micrograph.pixel_size 3.6800
_micrograph.units angstrom
_micrograph.voltage 1.2000e+05
_micrograph.ctf.amp_contrast 0.0700
_micrograph.ctf.defocus_min 10000.0
_micrograph.ctf.defocus_max 10000.0
_micrograph.ctf.astigmatism_angle 0.0000
_micrograph.ctf.Cs 2.0000e+07
_micrograph.ctf.amplitude_shift 0
_micrograph.ctf.amplitude_scale 1
_micrograph.ctf.s_shift 0
_micrograph.ctf.sigma 1
_micrograph.ctf.exp_amp_shift 0
_micrograph.ctf.exp_amplitude 1
_micrograph.ctf.exp_decay 1
_micrograph.tilt_axis 113.5
_micrograph.tilt_angle 0.0

loop_
_particle.number
_particle.theta
_particle.phi
_particle.omega
_particle.x_origin
_particle.y_origin
_particle.magnification
_particle.pft_cc
_particle.prj_cc
_particle.cmp_cc
_particle.select
1 77.000 -4.105 300.586 86.163 85.187 1.000 0.189 0.240 0.455 0
2 84.000 -19.105 1.055 86.048 90.266 1.000 0.289 0.255 0.466 1
3 71.000 0.000 17.578 87.991 89.051 1.000 0.239 0.225 0.413 1
4 76.000 4.122 90.000 85.867 88.903 1.000 0.273 0.276 0.509 1
5 81.000 0.000 202.500 87.922 88.190 1.000 0.245 0.259 0.460 1
6 85.000 19.073 235.898 89.041 90.706 1.000 0.344 0.284 0.502 1
7 78.000 -9.201 151.523 87.578 88.798 1.000 0.270 0.270 0.496 1
8 84.000 13.072 209.180 92.880 87.903 1.000 0.302 0.297 0.503 1
9 90.000 27.000 84.727 94.158 94.556 1.000 0.296 0.210 0.386 1
10 82.000 8.079 334.336 88.389 87.867 1.000 0.217 0.266 0.460 1
11 77.000 -9.237 316.758 89.748 90.496 1.000 0.375 0.303 0.545 1
12 78.000 7.156 227.109 88.125 89.477 1.000 0.259 0.279 0.508 1
13 79.092 -16.235 112.739 87.217 85.731 1.000 0.377 0.279 0.493 1
14 76.000 -11.337 312.891 90.801 90.369 1.000 0.313 0.210 0.343 0
15 86.000 19.046 242.227 91.192 88.245 1.000 0.142 0.200 0.338 0
16 90.000 -14.000 54.844 88.349 85.306 1.000 0.269 0.234 0.399 1
17 83.000 -17.128 30.234 87.238 92.173 1.000 0.298 0.278 0.454 1
18 90.000 12.000 194.063 88.524 88.713 1.000 0.256 0.243 0.419 1
19 87.000 12.016 197.930 87.981 85.912 1.000 0.224 0.244 0.442 1
20 76.000 11.337 87.188 92.682 89.139 1.000 0.206 0.126 0.203 0
21 81.000 -10.125 318.867 92.800 86.849 1.000 0.236 0.159 0.232 0
22 83.000 7.053 349.805 88.058 89.133 1.000 0.303 0.277 0.494 1
23 90.000 1.000 50.977 90.646 83.994 1.000 0.090 0.107 0.179 0
24 82.000 -17.167 338.203 91.556 85.925 1.000 0.312 0.284 0.488 1
25 87.000 10.014 270.703 90.645 88.078 1.000 0.164 0.232 0.409 0
26 81.000 -8.100 199.688 88.004 87.554 1.000 0.182 0.152 0.266 0
27 73.421 -7.042 20.781 88.152 88.380 1.000 0.194 0.149 0.240 0
28 81.000 -10.125 180.000 89.969 88.234 1.000 0.290 0.199 0.350 0
29 87.000 -21.029 82.266 87.888 86.405 1.000 0.289 0.281 0.496 1
30 82.000 6.059 357.891 88.674 87.987 1.000 0.255 0.187 0.338 0
31 78.000 9.201 341.016 89.010 86.094 1.000 0.296 0.252 0.433 0
32 82.000 -13.128 184.219 89.834 87.161 1.000 0.248 0.236 0.420 0
 
 
 
 

data_

_micrograph_particle.file_name poly5123.pif
_micrograph.pixel_size 3.6800
_micrograph.units angstrom
_micrograph.voltage 1.2000e+05
_micrograph.ctf.amp_contrast 0.0700
_micrograph.ctf.defocus_min 10000.0
_micrograph.ctf.defocus_max 10000.0
_micrograph.ctf.astigmatism_angle 0.0000
_micrograph.ctf.Cs 2.0000e+07
_micrograph.ctf.amplitude_shift 0
_micrograph.ctf.amplitude_scale 1
_micrograph.ctf.s_shift 0
_micrograph.ctf.sigma 1
_micrograph.ctf.exp_amp_shift 0
_micrograph.ctf.exp_amplitude 1
_micrograph.ctf.exp_decay 1
_micrograph.tilt_axis 113.5
_micrograph.tilt_angle -5.0

loop_
_particle.number
_particle.theta
_particle.phi
_particle.omega
_particle.x_origin
_particle.y_origin
_particle.magnification
_particle.pft_cc
_particle.prj_cc
_particle.cmp_cc
_particle.select
1 73.000 -6.274 299.883 88.711 87.024 1.000 0.217 0.186 0.388 0
2 84.000 -23.127 1.406 88.905 84.326 1.000 0.141 0.186 0.391 0
3 73.000 0.000 137.813 90.181 89.360 1.000 0.236 0.246 0.408 0
4 74.000 8.322 90.352 91.825 87.199 1.000 0.227 0.259 0.468 0
5 84.000 -2.011 202.500 89.113 88.206 1.000 0.205 0.250 0.451 0
6 87.000 17.023 236.250 91.433 85.609 1.000 0.269 0.259 0.425 0
7 83.000 -2.015 152.930 91.195 87.983 1.000 0.234 0.209 0.404 0
8 86.000 15.037 209.180 90.903 88.185 1.000 0.292 0.274 0.445 0
9 89.000 -30.005 120.586 90.049 90.887 1.000 0.246 0.233 0.407 0
10 82.000 2.020 332.930 90.145 84.961 1.000 0.234 0.214 0.365 0
11 78.000 13.290 202.852 89.230 88.271 1.000 0.275 0.205 0.385 0
12 80.000 7.108 226.406 87.356 85.118 1.000 0.336 0.269 0.453 0
13 77.137 -13.247 113.969 88.818 87.896 1.000 0.268 0.208 0.436 0
14 78.000 -9.201 313.594 89.192 87.847 1.000 0.267 0.231 0.413 0
15 89.000 -23.004 86.484 91.796 86.720 1.000 0.290 0.180 0.278 0
16 84.000 -6.033 53.789 91.411 86.660 1.000 0.175 0.204 0.345 0
17 81.000 17.212 279.141 83.593 88.752 1.000 0.315 0.297 0.507 0
18 88.000 -8.005 13.359 87.882 86.343 1.000 0.274 0.208 0.386 0
19 86.000 -15.037 17.930 88.239 85.945 1.000 0.239 0.165 0.276 0
20 86.000 3.007 250.664 93.132 85.126 1.000 0.161 0.127 0.210 0
21 81.000 -1.012 318.867 88.940 86.538 1.000 0.218 0.245 0.396 0
22 76.000 5.153 349.453 86.530 83.456 1.000 0.299 0.226 0.437 0
23 81.000 9.112 131.133 88.796 90.646 1.000 0.272 0.246 0.432 0
24 84.000 17.094 227.109 89.125 84.290 1.000 0.272 0.235 0.445 0
25 88.000 -5.003 91.406 89.966 85.462 1.000 0.250 0.227 0.387 0
26 76.000 8.245 85.078 89.363 89.834 1.000 0.279 0.210 0.362 0
27 87.000 -5.007 86.133 89.604 92.684 1.000 0.170 0.205 0.358 0
28 77.000 -7.184 180.352 89.493 88.472 1.000 0.253 0.235 0.434 0
29 83.000 -16.120 82.969 88.085 88.120 1.000 0.307 0.274 0.474 0