ProteinIdentifier

: Public Class

Created:	10/17/2008 3:51:44 PM
Modified:	3/25/2015 4:18:22 PM

Project:
Author:
Version:	1.0
Phase:	1.0
Status:
Complexity:	Easy
Difficulty:
Priority:
Multiplicity:
Advanced:
UUID:	{4521AF47-4FD8-405f-9657-F33FFEA13E8D}
Appears In:	UML-Based Comprehensive BRIDG Model Diagram, View MB: Molecular Biology

DEFINITION: The unique identification of a protein in a specified context. EXAMPLE(S): The ENSEMBL identifier, the RefSeq identifier, or the UniProt Knowledgebase identifier OTHER NAME(S): NOTE(S):

Attributes
Associations To
Tagged Values

Attribute

Public II
identifier

Details:

Alias:
Initial:
Stereotype:
Ordered:
Range:	Range:1. to 1
Transient:	False
Derived:	False
IsID:	False

Map:LSDAM=ProteinIdentifier.identifier

Notes:

DEFINITION:#lt;br /#gt;#lt;/p#gt;#lt;p#gt;A unique symbol that establishes the identity of the protein. #lt;br /#gt;#lt;/p#gt;#lt;p#gt;#lt;br /#gt;#lt;/p#gt;#lt;p#gt;EXAMPLE(S):#lt;br /#gt;#lt;/p#gt;#lt;p#gt;The identifier from the Ensembl or GenBank database#lt;br /#gt;#lt;/p#gt;#lt;p#gt;#lt;br /#gt;#lt;/p#gt;#lt;p#gt;OTHER NAME(S):#lt;br /#gt;#lt;/p#gt;#lt;p#gt;#lt;br /#gt;#lt;/p#gt;#lt;p#gt;NOTE(S):#lt;br /#gt;#lt;/p#gt;

Public CD
databaseNameCode

Details:

Alias:
Initial:
Stereotype:
Ordered:
Range:	Range:0 to 1
Transient:	False
Derived:	False
IsID:	False

Notes:

DEFINITION:#lt;br /#gt;#lt;/p#gt;#lt;p#gt;A coded value specifying the data base from which the identifier was assigned. #lt;br /#gt;#lt;/p#gt;#lt;p#gt;#lt;br /#gt;#lt;/p#gt;#lt;p#gt;EXAMPLE(S):#lt;br /#gt;#lt;/p#gt;#lt;p#gt;Ensembl, Universal Protein Resource Knowledgebase, GenBan.#lt;br /#gt;#lt;/p#gt;#lt;p#gt;#lt;br /#gt;#lt;/p#gt;#lt;p#gt;OTHER NAME(S):#lt;br /#gt;#lt;/p#gt;#lt;p#gt;#lt;br /#gt;#lt;/p#gt;#lt;p#gt;NOTE(S):#lt;br /#gt;#lt;/p#gt;#lt;p#gt;The use of GenBankAccession or GenBankAccessionWithVersion would be an implementation decision.#lt;br /#gt;#lt;/p#gt;

Element	Source Role	Target Role
Organization Class	Name: assignedProteinIdentifier	Name: assigningOrganization
Details: DESCRIPTION:<br /></p><p>Each ProteinIdentifier always is issued by one Organization. Each Organization might issue one or more ProteinIdentifier.<br /></p><p><br /></p><p>DEFINITION:<br /></p><p><br /></p><p>EXAMPLE(S):<br /></p><p><br /></p><p>OTHER NAME(S):<br /></p><p><br /></p><p>NOTE(S):<br /></p>
Protein Class	Name: identifyingProteinIdentifier	Name: identifiedProtein
Details: DESCRIPTION:<br /></p><p>Each ProteinIdentifier always identifies one Protein. Each Protein might be identified by one or more ProteinIdentifier.<br /></p><p><br /></p><p>DEFINITION:<br /></p><p><br /></p><p>EXAMPLE(S):<br /></p><p><br /></p><p>OTHER NAME(S):<br /></p><p><br /></p><p>NOTE(S):<br /></p>

Tag	Value
Map:LSDAM	ProteinIdentifier
Details:
Map:LSDAMv2.2.3Plus	ProteinIdentifier
Details: