: Public Class
Created: 7/30/2013 4:43:00 PM
Modified: 3/16/2015 1:29:31 PM
Project:
Advanced:
DEFINITION:<br /></p><p>A set of coordinated activities that is intended to achieve one or more objectives.<br /></p><p><br /></p><p>EXAMPLE(S):<br /></p><p>The Cancer Genome Atlas (TCGA)<br /></p><p>The Breast and Colon Cancer Family Registries<br /></p><p><br /></p><p>OTHER NAME(S):<br /></p><p><br /></p><p>NOTE(S):<br /></p>
Attribute
Public ST
  name
Details:
BaseModel=caArray.Experiment.title
description=The designation by which an experiment is referenced.
Map:LSDAM=ActivityCollection.name
Map:LSDAM=InvestigationalStudy.name
Map:LSDAMv2.2.3Plus=ActivityCollection.name
PropertyConceptCode=C42774
PropertyConceptDefinition=A general or descriptive designator for an object, work of art, or literary composition.
PropertyConceptDefinitionSource=NCI
PropertyConceptPreferredName=Title
Notes: DEFINITION:#lt;br /#gt;#lt;/p#gt;#lt;p#gt;A non-unique identifier by which the investigational study or experiment is known or referred.#lt;br /#gt;#lt;/p#gt;#lt;p#gt;#lt;br /#gt;#lt;/p#gt;#lt;p#gt;EXAMPLE(S):#lt;br /#gt;#lt;/p#gt;#lt;p#gt;The Cancer Genome Atlas (TCGA)#lt;br /#gt;#lt;/p#gt;#lt;p#gt;The Breast and Colon Cancer Family Registries#lt;br /#gt;#lt;/p#gt;#lt;p#gt;#lt;br /#gt;#lt;/p#gt;#lt;p#gt;OTHER NAME(S):#lt;br /#gt;#lt;/p#gt;#lt;p#gt;#lt;br /#gt;#lt;/p#gt;#lt;p#gt;NOTE(S):#lt;br /#gt;#lt;/p#gt;
Public SC
  type
Details:
CADSR_Description=Identifies the type of experiment, including, but not limited to, organism modification experiment, microarray experiment, tandem mass spectrometry experiment.
Map:LSDAM=ActivityCollection.typeCode
Map:LSDAM=InvestigationalStudy.typeCode
Map:LSDAMv2.2.3Plus=ActivityCollection.typeCode
PropertyConceptCode=C25162
PropertyQualifierConceptCode1=C25284
Notes: DEFINITION:#lt;br /#gt;#lt;/p#gt;#lt;p#gt;A term allowing the classification of investigational studies and experiments into categories.#lt;br /#gt;#lt;/p#gt;#lt;p#gt;#lt;br /#gt;#lt;/p#gt;#lt;p#gt;EXAMPLE(S):#lt;br /#gt;#lt;/p#gt;#lt;p#gt;WAS (genome wide association study, e.g., for colon cancer biomarkers)#lt;br /#gt;#lt;/p#gt;#lt;p#gt;Na+ Channel activity in yfg knockout mouse#lt;br /#gt;#lt;/p#gt;#lt;p#gt;Pharmacological activity of compound XYZ#lt;br /#gt;#lt;/p#gt;#lt;p#gt;microarray experiment#lt;br /#gt;#lt;/p#gt;#lt;p#gt;model organism experiment#lt;br /#gt;#lt;/p#gt;#lt;p#gt;#lt;br /#gt;#lt;/p#gt;#lt;p#gt;OTHER NAME(S):#lt;br /#gt;#lt;/p#gt;#lt;p#gt;#lt;br /#gt;#lt;/p#gt;#lt;p#gt;NOTE(S):#lt;br /#gt;#lt;/p#gt;
Public ST
  description
Details:
BaseModel=caArray.Experiment.description
CADSR_DE_VERSION=1.0
CURATOR_REVIEWED=1
description=A textual overview of the experiment.
Map:LSDAM=ActivityCollection.description
Map:LSDAM=InvestigationalStudy.description
Map:LSDAMv2.2.3Plus=ActivityCollection.description
OWNER_REVIEWED=1
PropertyConceptCode=C25365
PropertyConceptDefinition=A written or verbal account, representation, statement, or explanation of something.
PropertyConceptDefinitionSource=NCI
PropertyConceptPreferredName=Description
Notes: DEFINITION:#lt;br /#gt;#lt;/p#gt;#lt;p#gt;A textual explanation of the project, with components, such as objectives or goals. [source: ISA-TAB]#lt;br /#gt;#lt;/p#gt;#lt;p#gt;#lt;br /#gt;#lt;/p#gt;#lt;p#gt;EXAMPLE(S):#lt;br /#gt;#lt;/p#gt;#lt;p#gt;#lt;br /#gt;#lt;/p#gt;#lt;p#gt;OTHER NAME(S):#lt;br /#gt;#lt;/p#gt;#lt;p#gt;#lt;br /#gt;#lt;/p#gt;#lt;p#gt;NOTE(S):#lt;br /#gt;#lt;/p#gt;
Element Source Role Target Role
ProjectRelationship
Class   		Name: sourceProjectRelationship
  		Name: targetProject
 
Details:
DESCRIPTION:<br /></p><p>Each ProjectRelationship always has as target one Project.  Each Project might be the target for one or more ProjectRelationship.<br /></p><p><br /></p><p>DEFINITION:<br /></p><p><br /></p><p>EXAMPLE(S):<br /></p><p><br /></p><p>OTHER NAME(S):<br /></p><p><br /></p><p>NOTE(S):<br /></p>
ProjectConduct
Class   		Name: instantiatedProjectExecution
  		Name: instantiatingProject
 
Details:
DESCRIPTION:<br /></p><p>Each ProjectConduct always is the execution of one Project.  Each Project might be the plan for one ProjectConduct.<br /></p><p><br /></p><p>DEFINITION:<br /></p><p><br /></p><p>EXAMPLE(S):<br /></p><p><br /></p><p>OTHER NAME(S):<br /></p><p><br /></p><p>NOTE(S):<br /></p>
ProjectRelationship
Class   		Name: targetProjectRelationship
  		Name: sourceProject
 
Details:
DESCRIPTION:<br /></p><p>Each ProjectRelationship always has as source one Project.  Each Project might be the source for one or more ProjectRelationship.<br /></p><p><br /></p><p>DEFINITION:<br /></p><p><br /></p><p>EXAMPLE(S):<br /></p><p><br /></p><p>OTHER NAME(S):<br /></p><p><br /></p><p>NOTE(S):<br /></p>
PointOfContact
Class   		Name: supportingPointOfContact
  		Name: supportedProject
 
Details:
DESCRIPTION:<br /></p><p>Each PointOfContact might support one or more Project.  Each Project might be supported by one or more PointOfContact.<br /></p><p><br /></p><p>DEFINITION:<br /></p><p><br /></p><p>EXAMPLE(S):<br /></p><p><br /></p><p>OTHER NAME(S):<br /></p><p><br /></p><p>NOTE(S):<br /></p>
Tag Value
Map:LSDAM InvestigationalStudy
Details:
 
Map:LSDAMv2.2.3Plus InvestigationalStudy
Details:
 
Object Type Connection Direction Notes
ResearchProject Class Generalization From DESCRIPTION: Each ResearchProject always specializes one Project. Each Project might be specialized by one ResearchProject. DEFINITION: EXAMPLE(S): OTHER NAME(S): NOTE(S):
NonResearchProject Class Generalization From DESCRIPTION: Each NonResearchProject always specializes one Project. Each Project might be specialized by one NonResearchProject. DEFINITION: EXAMPLE(S): OTHER NAME(S): NOTE(S):