: Public Class
Created: 8/8/2006 2:22:28 PM
Modified: 8/10/2018 4:14:13 PM
Project:
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DEFINITION:<br/>A substance or portion of material originally obtained from an entity for use in testing, examination, or study.<br/><br/>EXAMPLE(S):<br/>Blood obtained by a specimen collection activity performed on a study subject.<br/>A few grains of cattle feed obtained from a feed sack.<br/>A randomly selected pill from a blister pack.<br/>A serum specimen that resulted from Centrifugation procedure performed on a blood specimen.<br/>A DNA specimen extraction from a saliva specimen.<br/>A Formalin-Fixed, Paraffin-Embedded (FFPE) block that resulted from a paraffin embedding procedure performed on a formalin fixed tissue specimen.<br/>A pooled blood sample that resulted from a mixing procedure performed on several blood samples taken from individual animals.<br/><br/>OTHER NAME(S):<br/>Biologic specimen<br/>Product specimen<br/><br/>NOTE(S):<br/>
Attribute
Public DSET<CD>
  conditionCode
Details:
Map:CDASHv1.1=LB.LBSPCCND
Map:CDISCLabv1.0.1=Base Specimen.Specimen Condition
Map:CTRv1.0=Specimen.conditionCode
Map:Lab=Specimen.condition
Map:LabViewer2.2=Specimen.condition
Map:NCI CRF Standard=CDE 2829883v1.0: Laboratory Specimen Condition Gross Type
Map:PGx v1.0=BS.BSSPCCND
Map:SDTM IGv3.1.1=LB.LBSPCCND
Map:SDTM IGv3.1.2=PC.PCSPCCND
Map:SDTM IGv3.1.2=MB.MBSPCCND
Map:SDTM IGv3.1.2=LB.LBSPCCND
Map:SDTM IGv3.1.3=PC.PCSPCCND
Map:SDTM IGv3.1.3=MB.MBSPCCND
Map:SDTM IGv3.1.3=LB.LBSPCCND
Notes: DEFINITION:<br/>A coded value specifying one of a discreet list of values describing the condition of the specimen at time of receipt at the lab.<br/><br/>EXAMPLE(S):<br/>Hemolyzed, Icteric, Lipemic<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>Derived from PerformedObservationResult.value(ANY=#gt;CD).code WHERE PerformedObservationResult #gt; PerformedObservation #gt; DefinedObservation.nameCode = "assess specimen condition"<br/>
Element Source Role Target Role
Material
Class   		Name: performedSpecimen
  		Name: performingMaterial
 
Details:
DESCRIPTION:<br/>Each Specimen always is a function performed by one Material.  Each Material might function as one Specimen.<br/><br/>DEFINITION:<br/><br/>EXAMPLE(S):<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>
SpecimenCollectionGroup
Class   		Name: containedSpecimen
  		Name: containingSpecimenCollectionGroup
 
Details:
DESCRIPTION:<br/>Each Specimen might be a part of one SpecimenCollectionGroup. Each SpecimenCollectionGroup might contain one or more Specimen.<br/><br/>DEFINITION:<br/><br/>EXAMPLE(S):<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>
PerformedSpecimenCollection
Class   		Name: producedSpecimen
  		Name: producingPerformedSpecimenCollection
 
Details:
DESCRIPTION:<br/>Each Specimen might be a result of one PerformedSpecimenCollection. Each PerformedSpecimenCollection might result in one or more Specimen.<br/><br/>DEFINITION:<br/><br/>EXAMPLE(S):<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>
Element Source Role Target Role
Subject
Class   		Name: performedSubject
  		Name: performingSpecimen
 
Details:
DESCRIPTION:<br/>Each Subject might be a function performed by one Specimen. Each Specimen might function as one or more Subject.<br/><br/>DEFINITION:<br/><br/>EXAMPLE(S):<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/><br/>
DefinedSpecimenCollection
Class   		Name: producingDefinedSpecimenCollection
  		Name: producedSpecimen
 
Details:
DESCRIPTION:<br/>Each DefinedSpecimenCollection always results in one or more Specimen. Each Specimen might be a result of one or more DefinedSpecimenCollection.<br/><br/>DEFINITION:<br/><br/>EXAMPLE(S):<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/><br/>
ExperimentalUnit
Class   		Name: performedExperimentalUnit
  		Name: performingSpecimen
 
Details:
DESCRIPTION:<br/>Each ExperimentalUnit might be a function performed by one Specimen. Each Specimen might function as one or more ExperimentalUnit. <br/><br/>DEFINITION:<br/><br/>EXAMPLE(S):<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/><br/>
Tag Value
Map:APSRv2.1 [Problem] hl7:organizer - [Problem] hl7:organizer > hl7:component [Lab Obs] > hl7:observation > hl7:entryRelationship [Specimen Collection] > hl7:procedure > hl7:participant
Details:
 
Map:APSRv2.1 [Problem] hl7:organizer - [Problem] hl7:organizer > hl7:component [Embedded Image] > hl7:observationMedia > hl7:specimen > hl7:specimenRole
Details:
 
Map:APSRv2.1 [Problem] hl7:organizer - [Problem] hl7:organizer > hl7:component [Lab Obs] > hl7:observation > hl7:entryRelationship [Specimen Collection] > hl7:procedure > hl7:participant > hl7:participantRole
Details:
 
Map:APSRv2.1 [Problem] hl7:organizer - [Problem] hl7:organizer > hl7:component [Any kind of AP observation] > hl7:observation > hl7:specimen > hl7:specimenRole
Details:
 
Map:APSRv2.1 SB: Procedure Steps Section - hl7:ClinicalDocument > hl7:component > hl7:structuredBody > hl7:component [Proc Steps] > hl7:section > hl7:entry > hl7:procedure > hl7:specimen > hl7:specimenRole
Details:
 
Map:CDISCLabv1.0.1 Base Specimen
Details:
 
Map:CDMHv1.0 Specimen
Details:
 
Map:CTRPv1.0 Material
Details:
 
Map:CTRRr3 BiologicSpecimen
Details:
 
Map:CTRv1.0 Specimen
Details:
 
Map:ICSRr2 Specimen (in R_Specimen universal)
Details:
 
Map:ICSRr2 Product (in R_Specimen universal)
Details:
 
Map:LabViewer2.2 Specimen
Details:
 
Object Type Connection Direction Notes
BiologicSpecimen Class Generalization From DESCRIPTION: Each BiologicSpecimen always specializes one Specimen. Each Specimen might be specialized by one BiologicSpecimen. DEFINITION: EXAMPLE(S): OTHER NAME(S): NOTE(S):