: Public Class
Created: 10/17/2008 12:06:08 AM
Modified: 8/26/2017 2:24:22 AM
Project:
Advanced:
DEFINITION:<br/>A position or a region on an amino acid sequence.<br/><br/>EXAMPLE(S):<br/>amino acids 3 to 10 of TP53 protein, amino acids 102 to 292 of TP53 protein defining a DNA binding region. <br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>
Attribute
Public INT.NONNEG
  startCoordinate
Details:
Map:LSDAMv2.2.3Plus=AminoAcidPhysicalLocation.startCoordinate
Notes: DEFINITION:<br/>The beginning coordinate of the range (inclusive), given as an integer offset from the start of the sequence.<br/><br/>EXAMPLE(S):<br/>For amino acids 3 to 10 of the TP53 protein the start coordinate would be 3.<br/>For amino acids 102 to 292 of the TP53 protein defining a DNA binding region the start coordinate would be 102.<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>
Public INT.NONNEG
  endCoordinate
Details:
Map:LSDAMv2.2.3Plus=AminoAcidPhysicalLocation.startCoordinate
Notes: DEFINITION:<br/>The terminal coordinate of the range (inclusive), given as an integer offset from the start of the sequence.<br/><br/>EXAMPLE(S):<br/>For amino acids 3 to 10 of the TP53 protein the end coordinate would be 10.<br/>For amino acids 102 to 292 of the TP53 protein defining a DNA binding region the end coordinate would be 292.<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>
Element Source Role Target Role
AminoAcidSequence
Class  
Name: includingAminoAcidPhysicalLocation
 
Name: includedAminoAcidSequence
 
Details:
DESCRIPTION:<br/>Each AminoAcidPhysicalLocation always includes one AminoAcidSequence. Each AminoAcidSequence might be included in one or more AminoAcidPhysicalLocation. <br/><br/>DEFINITION:<br/><br/>EXAMPLE(S):<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>
Element Source Role Target Role
AminoAcidSequenceFeature
Class  
Name: includedAminoAcidSequenceFeature
 
Name: includingAminoAcidPhysicalLocation
 
Details:
DESCRIPTION:<br/>Each AminoAcidSequenceFeature always is included in one or more AminoAcidPhysicalLocation. Each AminoAcidPhysicalLocation might include one or more AminoAcidSequenceFeature.<br/><br/>DEFINITION:<br/><br/>EXAMPLE(S):<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>
Tag Value
Map:LSDAMv2.2.3Plus AminoAcidPhysicalLocation
Details: