Out of Scope for HL7 Sep 2018 Ballot Cycle: Molecular Biology Sub-Domain::MolecularSequence

: Public Class

Created:	10/17/2008 11:37:08 AM
Modified:	8/26/2017 2:24:25 AM

Project:
Author:
Version:	1.0
Phase:	1.0
Status:
Complexity:	Easy
Difficulty:
Priority:
Multiplicity:
Advanced:
UUID:	{FD7C858E-0293-46d9-AC19-E9496E02E711}
Appears In:	UML-Based Comprehensive BRIDG Model Diagram, View EX: Experiment, View MB: Molecular Biology

DEFINITION: A representation of a linear arrangement of organic compounds. EXAMPLE(S): The sequence of TP53 protein, the sequence of TP53 gene, the first 20 nucleotides of a BRCA1 mRNA OTHER NAME(S): NOTE(S):

Attributes
Associations To
Associations From
Tagged Values
Other Links

Attribute

Public SC
value

Details:

Alias:
Initial:
Stereotype:
Ordered:
Range:	Range:0 to 1
Transient:	False
Derived:	False
IsID:	False

Map:LSDAMv2.2.3Plus=MolecularSequence.value

Notes:

DEFINITION: A representation of the molecular sequence, usually in abbreviated form and expressed according to conventional practices. EXAMPLE(S): DNA sequences are usually expressed as a string of A, C, G, and T characters starting from the 5' end of the sequence, while protein sequences are usually given as a string of single character amino acid codes starting at the N-terminus. In both cases, IUPAC codes are generally used to represent the sequence. OTHER NAME(S): NOTE(S):

Element	Source Role	Target Role
Material Class	Name: characterizingMolecularSequence	Name: characterizedMaterial
Details: DESCRIPTION:<br/>Each MolecularSequence might characterize one or more Material. Each Material might be characterized by one or more MolecularSequence.<br/><br/>DEFINITION:<br/><br/>EXAMPLE(S):<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>
BiologicEntityClassification Class	Name: includedMolecularSequence	Name: includingBiologicEntityClassification
Details: DESCRIPTION:<br/>Each MolecularSequence always is included in one BiologicEntityClassification. Each BiologicEntityClassification might include one or more MolecularSequence.<br/><br/>DEFINITION:<br/><br/>EXAMPLE(S):<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>

Element	Source Role	Target Role
ExperimentalActivityItem Class	Name: playedExperimentalActivityItem	Name: playingMolecularSequence
Details: DESCRIPTION:<br/>Each ExperimentalActivityItem might be played by one MolecularSequence. Each MolecularSequence might play one or more ExperimentalActivityItem. <br/><br/>DEFINITION:<br/><br/>EXAMPLE(S):<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>

Tag	Value
Map:LSDAMv2.2.3Plus	MolecularSequence
Details:

Object	Type	Connection	Direction	Notes
AminoAcidSequence	Class	Generalization	From	DESCRIPTION: Each AminoAcidSequence always specializes one MolecularSequence. Each MolecularSequence might be specialized by one AminoAcidSequence. DEFINITION: EXAMPLE(S): OTHER NAME(S): NOTE(S):
NucleicAcidSequence	Class	Generalization	From	DESCRIPTION: Each AminoAcidSequence always specializes one MolecularSequence. Each MolecularSequence might be specialized by one AminoAcidSequence. DEFINITION: EXAMPLE(S): OTHER NAME(S): NOTE(S):