repo https://github.com/CBIIT/ctdc-model commit fc527a3 node property value_or_TYPE associated_link associated_link_id STRING associated_link associated_link_name STRING associated_link associated_link_url STRING data_file data_file_checksum_type md5sum data_file data_file_checksum_type sha1 data_file data_file_checksum_type sha256 data_file data_file_checksum_value STRING data_file data_file_compression_status Compressed data_file data_file_compression_status Uncompressed data_file data_file_compression_status Unknown data_file data_file_description STRING data_file data_file_format docx data_file data_file_format gz data_file data_file_format pdf data_file data_file_format vcf data_file data_file_format zip data_file data_file_location STRING data_file data_file_name STRING data_file data_file_size NUMBER data_file data_file_type Clinical Report data_file data_file_type File Collection data_file data_file_type Variant Call File data_file data_file_type Variant Report data_file data_file_uuid STRING demographic age_at_enrollment NUMBER (years) demographic body_surface_area NUMBER (m2) demographic demographic_id STRING demographic ethnicity Hispanic or Latino demographic ethnicity Not Hispanic or Latino demographic ethnicity Not reported demographic ethnicity Unknown demographic height NUMBER (cm) demographic highest_level_of_education Bachelor's degree demographic highest_level_of_education Declined to answer demographic highest_level_of_education Doctoral or professional degree demographic highest_level_of_education Grade school demographic highest_level_of_education High school graduate (including equivalency) demographic highest_level_of_education Master's degree demographic highest_level_of_education No formal education demographic highest_level_of_education Not high school graduate demographic highest_level_of_education Some college or Associate degree demographic income STRING demographic ncbi_taxonomy_id INTEGER demographic ncbi_taxonomy_name STRING demographic occupation STRING demographic race American Indian or Alaska Native demographic race Black or African American demographic race Native Hawaiian or other Pacific Islander demographic race Not Reported demographic race Unknown demographic reported_gender Female demographic reported_gender Female-to-Male Transsexual demographic reported_gender Intersex demographic reported_gender Male demographic reported_gender Male-to-Female Transsexual demographic reported_gender Response Declined demographic reported_gender Unknown demographic sex Female demographic sex Intersex demographic sex Male demographic sex Unknown demographic weight NUMBER (kg) diagnosis ctep_disease_term Acute Myeloid Leukemia Not Otherwise Specified diagnosis ctep_disease_term Adenocarcinoma of the Gastroesophageal Junction diagnosis ctep_disease_term Colorectal Carcinoma diagnosis ctep_disease_term Invasive Breast Carcinoma diagnosis ctep_disease_term Melanoma diagnosis ctep_disease_term Non-Small Cell Lung Carcinoma diagnosis ctep_disease_term Ovarian Carcinoma diagnosis ctep_disease_term Plasma Cell Myeloma diagnosis ctep_disease_term Prostate Carcinoma diagnosis ctep_disease_term Small Cell Lung Carcinoma diagnosis date_of_diagnosis NA diagnosis diagnosis_id STRING diagnosis histological_subtype STRING diagnosis histology STRING diagnosis meddra_disease_code 10000884 diagnosis meddra_disease_code 10006190 diagnosis meddra_disease_code 10010029 diagnosis meddra_disease_code 10028566 diagnosis meddra_disease_code 10029514 diagnosis meddra_disease_code 10033159 diagnosis meddra_disease_code 10036910 diagnosis meddra_disease_code 10041071 diagnosis meddra_disease_code 10053571 diagnosis meddra_disease_code 10066354 diagnosis primary_diagnosis_disease_group Acute myeloid leukemia, NOS diagnosis primary_diagnosis_disease_group Adenocarcinoma of the gastroesophageal junction diagnosis primary_diagnosis_disease_group Colorectal cancer, NOS diagnosis primary_diagnosis_disease_group Esophageal cancer, NOS diagnosis primary_diagnosis_disease_group Fallopian tube carcinoma diagnosis primary_diagnosis_disease_group Gastric cancer, NOS diagnosis primary_diagnosis_disease_group Invasive breast carcinoma diagnosis primary_diagnosis_disease_group Melanoma diagnosis primary_diagnosis_disease_group Myeloma, NOS diagnosis primary_diagnosis_disease_group Non-small cell lung cancer, NOS diagnosis primary_diagnosis_disease_group Ovarian epithelial cancer diagnosis primary_diagnosis_disease_group Primary peritoneal carcinoma diagnosis primary_diagnosis_disease_group Prostate cancer, NOS diagnosis primary_diagnosis_disease_group Small cell lung cancer diagnosis primary_disease_site STRING diagnosis snomed_disease_code 109989006 diagnosis snomed_disease_code 128922003 diagnosis snomed_disease_code 17788007 diagnosis snomed_disease_code 188717001 diagnosis snomed_disease_code 2092003 diagnosis snomed_disease_code 2142002 diagnosis snomed_disease_code 253000007 diagnosis snomed_disease_code 254582000 diagnosis snomed_disease_code 254626006 diagnosis snomed_disease_code 254632001 diagnosis snomed_disease_code 254633006 diagnosis snomed_disease_code 254634000 diagnosis snomed_disease_code 254637007 diagnosis snomed_disease_code 254730000 diagnosis snomed_disease_code 254731001 diagnosis snomed_disease_code 254838004 diagnosis snomed_disease_code 254900004 diagnosis snomed_disease_code 269533000 diagnosis snomed_disease_code 276803003 diagnosis snomed_disease_code 28899001 diagnosis snomed_disease_code 35917007 diagnosis snomed_disease_code 37138001 diagnosis snomed_disease_code 372244006 diagnosis snomed_disease_code 399068003 diagnosis snomed_disease_code 399490008 diagnosis snomed_disease_code 399730005 diagnosis snomed_disease_code 402815007 diagnosis snomed_disease_code 408645001 diagnosis snomed_disease_code 408647009 diagnosis snomed_disease_code 428054006 diagnosis snomed_disease_code 443961001 diagnosis snomed_disease_code 448993007 diagnosis snomed_disease_code 55921005a diagnosis snomed_disease_code 55921005b diagnosis snomed_disease_code 70594002 diagnosis snomed_disease_code 72495009 diagnosis snomed_disease_code 74364000 diagnosis snomed_disease_code 93655004 diagnosis snomed_disease_term Acute Myeloid Leukemia 17788007 diagnosis snomed_disease_term Adenocarcinoma 35917007 diagnosis snomed_disease_term Adenocarcinoma 443961001 diagnosis snomed_disease_term Amelanotic Melanoma 70594002 diagnosis snomed_disease_term Breast Carcinoma 254838004 diagnosis snomed_disease_term Colon Adenoma 428054006 diagnosis snomed_disease_term Colon Carcinoma 269533000 diagnosis snomed_disease_term Colorectal Adenocarcinoma 408645001 diagnosis snomed_disease_term Cutaneous Melanoma 93655004 diagnosis snomed_disease_term Epithelioid Cell Melanoma 37138001 diagnosis snomed_disease_term Esophageal Adenocarcinoma 276803003 diagnosis snomed_disease_term Gastric Adenocarcinoma 408647009 diagnosis snomed_disease_term Lung Adenocarcinoma 254626006 diagnosis snomed_disease_term Lung Carcinoma 448993007 diagnosis snomed_disease_term Melanoma 2092003 diagnosis snomed_disease_term Melanoma 372244006 diagnosis snomed_disease_term Mucinous Adenocarcinoma 72495009 diagnosis snomed_disease_term Multiple myeloma 55921005 diagnosis snomed_disease_term Multiple myeloma and immunoproliferative disease 188717001 diagnosis snomed_disease_term Neuroendocrine Carcinoma 253000007 diagnosis snomed_disease_term Nodular Melanoma 2142002 diagnosis snomed_disease_term Nodular Melanoma 254731001 diagnosis snomed_disease_term Non-Small Cell Lung Carcinoma 254637007 diagnosis snomed_disease_term Plasma Cell Leukemia 128922003 diagnosis snomed_disease_term Plasma Cell Myeloma 109989006 diagnosis snomed_disease_term Plasma Cell Myeloma 55921005 diagnosis snomed_disease_term Prostate Adenocarcinoma 399490008 diagnosis snomed_disease_term Prostate Carcinoma 254900004 diagnosis snomed_disease_term Prostate Carcinoma 399068003 diagnosis snomed_disease_term Rectal Adenoma 399730005 diagnosis snomed_disease_term Rectal Carcinoma 254582000 diagnosis snomed_disease_term Small Cell Carcinoma 74364000 diagnosis snomed_disease_term Small Cell Lung Carcinoma 254632001 diagnosis snomed_disease_term Small Cell Lung Carcinoma 254633006 diagnosis snomed_disease_term Squamous Cell Carcinoma 28899001 diagnosis snomed_disease_term Squamous Cell Carcinoma 402815007 diagnosis snomed_disease_term Squamous Cell Lung Carcinoma 254634000 diagnosis snomed_disease_term Superficial Spreading Melanoma 254730000 diagnosis stage_of_disease Stage III diagnosis stage_of_disease Stage IIIA diagnosis stage_of_disease Stage IIIB diagnosis stage_of_disease Stage IIIC diagnosis stage_of_disease Stage IV diagnosis stage_of_disease Stage IVA diagnosis stage_of_disease Stage IVB diagnosis stage_of_disease Stage IVC diagnosis tumor_grade Borderline malignancy diagnosis tumor_grade Grade cannot be assessed diagnosis tumor_grade Moderately Differentiated diagnosis tumor_grade Poorly Differentiated diagnosis tumor_grade Undifferentiated grade diagnosis tumor_grade Well Differentiated exposure carcinogen_exposure No exposure carcinogen_exposure Unknown exposure carcinogen_exposure Yes exposure environmental_exposure_type Asbestos Exposure exposure environmental_exposure_type Chemical Exposure exposure environmental_exposure_type Marijuana Smoke Exposure exposure environmental_exposure_type Radiation Exposure exposure environmental_exposure_type Radon Exposure exposure environmental_exposure_type Respirable Crystalline Silica Exposure exposure environmental_exposure_type Smoke Exposure exposure environmental_exposure_type Smokeless Tobacco Exposure exposure environmental_exposure_type Tobacco Related Exposure exposure environmental_exposure_type Wood Dust Exposure exposure exposure_id STRING image_collection collection_access Cloud image_collection collection_access Download image_collection collection_access Unrestricted image_collection image_collection_id STRING image_collection image_collection_name STRING image_collection image_collection_url STRING image_collection repository_name STRING non_targeted_therapy best_response_to_non_targeted_therapy Complete Response non_targeted_therapy best_response_to_non_targeted_therapy Less than partial response non_targeted_therapy best_response_to_non_targeted_therapy Not Assessed non_targeted_therapy best_response_to_non_targeted_therapy Not Evaluable non_targeted_therapy best_response_to_non_targeted_therapy Partial Response non_targeted_therapy best_response_to_non_targeted_therapy Progressive Disease non_targeted_therapy best_response_to_non_targeted_therapy Stable Disease non_targeted_therapy best_response_to_non_targeted_therapy Too Early non_targeted_therapy best_response_to_non_targeted_therapy Unknown non_targeted_therapy non_targeted_therapy STRING non_targeted_therapy non_targeted_therapy_dose STRING non_targeted_therapy non_targeted_therapy_dose_units STRING non_targeted_therapy non_targeted_therapy_end_date INTEGER non_targeted_therapy non_targeted_therapy_frequency STRING non_targeted_therapy non_targeted_therapy_id STRING non_targeted_therapy non_targeted_therapy_start_date INTEGER principal_investigator person_first_name STRING principal_investigator person_last_name STRING principal_investigator person_middle_name STRING principal_investigator person_orcid STRING program program_name STRING program program_short_name STRING project project_name STRING project project_short_name STRING radiotherapy best_response_to_radiotherapy Complete Response radiotherapy best_response_to_radiotherapy Less than partial response radiotherapy best_response_to_radiotherapy Not Assessed radiotherapy best_response_to_radiotherapy Not Evaluable radiotherapy best_response_to_radiotherapy Partial Response radiotherapy best_response_to_radiotherapy Progressive Disease radiotherapy best_response_to_radiotherapy Stable Disease radiotherapy best_response_to_radiotherapy Too Early radiotherapy best_response_to_radiotherapy Unknown radiotherapy radiation_dose STRING radiotherapy radiation_dose_units STRING radiotherapy radiation_extent STRING radiotherapy radiation_frequency STRING radiotherapy radiological_procedure STRING radiotherapy radiological_procedure_anatomical_location STRING radiotherapy radiological_procedure_id STRING radiotherapy radiotherapy_end_date INTEGER radiotherapy radiotherapy_start_date INTEGER specimen anatomical_collection_site STRING specimen assessment_timepoint ARCHIVAL specimen assessment_timepoint BASELINE specimen assessment_timepoint ON TREATMENT specimen assessment_timepoint PROGRESSION specimen collection_date NUMBER (days) specimen parent_specimen_id STRING specimen parent_specimen_type Bone Marrow Aspirate specimen parent_specimen_type Cell Block specimen parent_specimen_type EDTA Blood specimen parent_specimen_type FFPE Block specimen parent_specimen_type Formalin Bone Marrow Biopsy specimen parent_specimen_type Formalin Fixed Tissue specimen parent_specimen_type Snap Frozen Tissue specimen parent_specimen_type Stained Bone Marrow Aspirate Slide specimen parent_specimen_type Streck Blood specimen parent_specimen_type Unstained Bone Marrow Aspirate Slide specimen parent_specimen_type Unstained Slide specimen specimen_category BLOOD specimen specimen_category BONE MARROW specimen specimen_category BUCCAL CELL SAMPLE specimen specimen_category CEREBROSPINAL FLUID specimen specimen_category FORMALIN FIXED PARAFFIN EMBEDDED TISSUE specimen specimen_category FORMALIN FIXED TISSUE specimen specimen_category FRESH TISSUE specimen specimen_category FROZEN TISSUE specimen specimen_category OTHER BODILY FLUIDs specimen specimen_category SALIVA specimen specimen_category STOOL specimen specimen_category URINE specimen specimen_id STRING specimen specimen_type BMMC specimen specimen_type Blood Pellet specimen specimen_type Cells specimen specimen_type Curl specimen specimen_type DNA specimen specimen_type FFPE Block specimen specimen_type Glass H&E Slide specimen specimen_type Glass Slide Smear specimen specimen_type Glass Unstained Slide specimen specimen_type PBMC specimen specimen_type Plasma specimen specimen_type Plasma-cf specimen specimen_type RNA specimen specimen_type Snap Frozen Unfixed Tissue specimen specimen_type Tissue Curl specimen specimen_type cDNA specimen tissue_category Metastatic specimen tissue_category Normal specimen tissue_category Primary study dates_of_conduct STRING study study_description STRING study study_id STRING study study_name STRING study study_short_name STRING study study_type Adverse Effect Mitigation Study study study_type Ancillary Study study study_type Basic Science Research study study_type Correlative Study study study_type Cure Study study study_type Device Feasibility Study study study_type Diagnosis Study study study_type Disease Modifying Treatment Study study study_type Early Detection Study study study_type Education Training Clinical Study study study_type Epidemiology Research study study_type Genomics Research study study_type Health Services Research study study_type Imaging Research study study_type Observational Study study study_type Outcomes Research study study_type Prevention Study study study_type Proteomic Research study study_type Rehabilitation Clinical Study study study_type Screening Study study study_type Supportive Care Study study study_type Transcriptomics Research study study_type Treatment Study subject biomarker_results_available No subject biomarker_results_available Unknown subject biomarker_results_available Yes subject histology_images_available No subject histology_images_available Unknown subject histology_images_available Yes subject radiology_images_available No subject radiology_images_available Unknown subject radiology_images_available Yes subject radiology_report_available No subject radiology_report_available Unknown subject radiology_report_available Yes subject subject_id STRING subject_status off_study No subject_status off_study Unknown subject_status off_study Yes subject_status off_study_reason ADVERSE EVENT subject_status off_study_reason APPROVED DRUG AVAILABLE FOR INDICATION subject_status off_study_reason COMPLETED subject_status off_study_reason DEATH subject_status off_study_reason DISEASE RELAPSE subject_status off_study_reason FAILURE TO MEET CONTINUATION CRITERIA subject_status off_study_reason FAILURE TO MEET RANDOMIZATION CRITERIA subject_status off_study_reason LACK OF EFFICACY subject_status off_study_reason LOGISTICAL PROBLEM subject_status off_study_reason LOST TO FOLLOW-UP subject_status off_study_reason MET ELIGIBILITY CRITERIA BUT NOT NEEDED subject_status off_study_reason NEVER DOSED subject_status off_study_reason NO LONGER CLINICALLY BENEFITING subject_status off_study_reason NON-COMPLIANCE WITH NON-STUDY DEVICE subject_status off_study_reason NON-COMPLIANCE WITH STUDY DEVICE subject_status off_study_reason NON-COMPLIANCE WITH STUDY DRUG subject_status off_study_reason NON-COMPLIANCE WITH STUDY SCHEDULE subject_status off_study_reason OTHER subject_status off_study_reason PARTNER PREGNANCY subject_status off_study_reason PHYSICIAN DECISION subject_status off_study_reason PREGNANCY subject_status off_study_reason PROGRESSIVE DISEASE subject_status off_study_reason PROTOCOL DEVIATION subject_status off_study_reason PROTOCOL VIOLATION subject_status off_study_reason PROTOCOL-SPECIFIED WITHDRAWAL CRITERION MET subject_status off_study_reason RANDOMIZED BY MISTAKE subject_status off_study_reason RANDOMIZED BY MISTAKE WITH STUDY TREATMENT subject_status off_study_reason RANDOMIZED BY MISTAKE WITHOUT STUDY TREATMENT subject_status off_study_reason RECOVERY subject_status off_study_reason REQUIRES PROHIBITED MEDICATION subject_status off_study_reason SCREEN FAILURE subject_status off_study_reason SCREENING NOT COMPLETED subject_status off_study_reason SITE TERMINATED BY SPONSOR subject_status off_study_reason SPONSOR REQUEST subject_status off_study_reason STUDY TERMINATED BY SPONSOR subject_status off_study_reason TECHNICAL PROBLEMS subject_status off_study_reason WITHDRAWAL BY PARENT/GUARDIAN subject_status off_study_reason WITHDRAWAL BY SUBJECT subject_status off_study_reason WITHDRAWAL OF ASSENT subject_status off_study_reason WITHDRAWAL OF CONSENT subject_status primary_cause_of_death STRING subject_status subject_status_id STRING subject_status survival_status Alive with Disease subject_status survival_status Alive with No Evidence of Disease subject_status survival_status Alive, Disease Status Unknown subject_status survival_status Dead surgery extent_of_residual_disease STRING surgery surgical_procedure STRING surgery surgical_procedure_anatomical_location STRING surgery surgical_procedure_date DATE surgery surgical_procedure_findings STRING surgery surgical_procedure_id STRING surgery surgical_procedure_therapeutic No surgery surgical_procedure_therapeutic Yes targeted_therapy best_response_to_targeted_therapy Complete Response targeted_therapy best_response_to_targeted_therapy Less than partial response targeted_therapy best_response_to_targeted_therapy Not Assessed targeted_therapy best_response_to_targeted_therapy Not Evaluable targeted_therapy best_response_to_targeted_therapy Partial Response targeted_therapy best_response_to_targeted_therapy Progressive Disease targeted_therapy best_response_to_targeted_therapy Stable Disease targeted_therapy best_response_to_targeted_therapy Too Early targeted_therapy best_response_to_targeted_therapy Unknown targeted_therapy targeted_therapy STRING targeted_therapy targeted_therapy_dose STRING targeted_therapy targeted_therapy_dose_units STRING targeted_therapy targeted_therapy_end_date INTEGER targeted_therapy targeted_therapy_frequency STRING targeted_therapy targeted_therapy_id STRING targeted_therapy targeted_therapy_start_date INTEGER relationship source_node destination_node property value_or_TYPE associated_with image_collection study NA NA associated_with image_collection project NA NA associated_with associated_link study NA NA associated_with associated_link project NA NA associated_with data_file diagnosis NA NA associated_with data_file project NA NA associated_with data_file study NA NA associated_with data_file subject NA NA associated_with data_file specimen NA NA belongs_to study program NA NA belongs_to study project NA NA belongs_to project program NA NA belongs_to subject study NA NA directs principal_investigator study NA NA directs principal_investigator project NA NA of_subject subject_status subject NA NA of_subject radiotherapy subject NA NA of_subject surgery subject NA NA of_subject diagnosis subject NA NA of_subject targeted_therapy subject NA NA of_subject demographic subject NA NA of_subject specimen subject NA NA of_subject exposure subject NA NA of_subject non_targeted_therapy subject NA NA property description age_at_enrollment The age of the subject as of enrollment, measured in years.
CDE ID = 12299548 (added 05-31-24) anatomical_collection_site This is CMB's version of "sample site".
CDE ID = 12083894 (added 06-03-24) assessment_timepoint CMB Catalog Site's "Collection Timepoint".
CDE ID = 5899851 (updated 06-03-24) associated_link_id A unique identifier of each associated link record, used to identify the correct associated link records during data updates.
CDE ID = 14822135 (added 05-28-24) associated_link_name The exact text to be displayed within the UI and used as an intuitive identifier of any given link associated with the study/trial in question.
CDE ID = 14822136 (added 05-28-24) associated_link_url The url to which an end user will be redirected upon selection of the corresponding link name displayed within the UI.
CDE ID = 14822140 (added 05-28-24) best_response_to_non_targeted_therapy An indication as to the best overall response to treatment with the non-targeted therapy in question.
CDE ID = 13383448 (added 05-29-24) best_response_to_radiotherapy An indication as to the best overall response to the radiotherapy in question.
CDE ID = 13383448 (added 05-29-24) best_response_to_targeted_therapy An indication as to the best overall response to treatment with the targeted therapy in question.
CDE ID = 13383448 (added 05-29-24) biomarker_results_available An indicator as to whether any biomarker results relating to the subject in question are available.
NOT CURRENTLY ASSIGNED ANY CDE body_surface_area The body surface area of the subject as of enrollment, mathematically derived from the subject's height and weight, and expressed in square meters.
CDE ID = 653 (added 05-31-24) carcinogen_exposure An indicator as to whether the subject in question has had significant exposure to any known carcinogen(s)
CDE ID = 5205578 (added 05-31-24) collection_access Indicator as to whether the image collection can be accessed only via the cloud, accessed only via download, or accessed via both mechanisms.
CDE ID = 14825946 (added 05-28-24) collection_date From the CMB perspective, this may be equivalent to "days_from_diagnosis_to_specimen_collection" (now block commented out) (CDE ID = 11253404), with collection date indexed to enrollment date.
CDE ID 6401821 ctep_disease_term
CDE ID = 4723846 (added 05-28-24) data_file_checksum_type
CDE ID = 11475057 (correct as of 05-30-24) data_file_checksum_value
CDE ID = 11480133 (correct as of 05-30-24) data_file_compression_status
CDE ID = 11387114 (correct as of 05-30-24) data_file_description For example, the file's derivation from a specimen of normal tissue versus tumor tissue.
CDE ID = 11280338 (correct as of 05-30-24) data_file_format ; the electronic format of the file, as derived during file validation
With the actual values of this property being loader derived, the acceptable values currently specified are in place only to support the generation of mock data
CDE ID = 11416926 (correct as of 05-30-24) data_file_location The specific location within the S3 storage bucket at which the file is stored, expressed in terms of a unique url
CDE ID = 11556141 (added 05-30-24) data_file_name , inclusive of file extension(s).
CDE ID = 11284037 (correct as of 05-30-24) data_file_size
CDE ID = 11479876 (correct as of 05-30-24) data_file_type A curated indicator as to the type of content represented by the data file
CDE ID = 14824731 (added 05-30-24) data_file_uuid
CDE ID = 14826100 (added 05-30-24) dates_of_conduct The timespan over which the study/trial was/is being conducted.
NOT CURRENTLY ASSIGNED ANY CDE demographic_id A unique identifier of each demographic record, used to identify the correct demographic records during data updates.
The value of this property will generally be the same as the value of the subject_id property.
CDE ID = 14822135 (added 05-31-24) diagnosis_id A unique identifier of each diagnosisc record, used to identify the correct diagnosis records during data updates.
The value of this property will generally be the same as the value of the subject_id property.
CDE ID = 14822135 (added 05-28-24)
This property is used as the key via which child records, e.g. clinical reports, can be associated with the appropriate diagnosis record during data loading, and to identify the correct records during data updates. environmental_exposure_type
CDE ID = 11256813 (correct as of 05-31-24) ethnicity
CDE ID = 2192217 (added 05-31-24) exposure_id A unique identifier of each exposure record, used to identify the correct exposure records during data updates. The value of this property will generally be the same as the value of the subject_id property.
CDE ID = 14822135 (added 05-31-24) extent_of_residual_disease
CDE ID = 13362284 (added 05-29-24) height The height of the subject as of enrollment, measured in cm.
CDE ID = 2179643 (added 05-31-24) highest_level_of_education An indication as to the highest level of education attained by the subject.
CDE ID = 2681552 (added 05-31-24) histological_subtype CDE ID = 14843594 (added 05-28-24) histology
CDE ID = 14842510 (added 05-28-24) histology_images_available An indicator as to whether any histology images relating to the subject in question are available.
NOT CURRENTLY ASSIGNED ANY CDE image_collection_id A unique identifier of each image collection record, used to identify the correct image collection records during data updates.
CDE ID = 14822135 (added 05-28-24) image_collection_name The name of the image collection exactly as it appears at the location where the collection can be viewed and/or accessed.
CDE ID = 14826008 (added 05-28-24) image_collection_url The external url via which the image collection can be viewed and/or accessed.
CDE ID = 11556141 (added 05-28-24) image_type_included A list of the image types included in the image collection, drawn from a list of acceptable values.
CDE ID = 12137353 (added 05-28-24) income
CDE ID = 14834966 (added 05-31-24) meddra_disease_code An eight digit numerical code for the primary disease with which the subject in question has been diagnosed.
CDE ID = 2004425 (added 05-28-24) ncbi_taxonomy_id A label provided by NCBI Taxonomy Database (https://www.ncbi.nlm.nih.gov/taxonomy/), which uniquely identifies group or category, at any level, in a system for classifying plants or animals (including humans) providing ranked categories for the classification of organisms according to their suspected evolutionary relationships.
CDE ID = 10543100 (correct as of 05-31-24) ncbi_taxonomy_name The textual label associated with a subject's organismal classification as captured in the National Center for Biotechnology Information (NCBI) Taxonomy standard nomenclature and classification repository.
Supposedly enumerated but no permissible values specified.
CDE ID = 10543082 (correct as of 05-31-24) non_targeted_therapy The name of the therapeutic agent administered to a subject as a non-targeted therapy, i.e. one that is considered to be appropriate for and effective against the specific type of cancer with which the subject has been diagnosed, but is not considered to have significantly enhanced therapeutic effects upon that cancer in general or upon that cancer specifically within the context of a given subject. Notably, a therapeutic agent considered to be and administered as a non-targeted therapy in one subject can, conversely, be considered and administered as a targeted therapy in another subject, where differences in his or her type of cancer per se, or the specific context of the cancer in question make the therapy more specific.
CDE ID = 14913015 (updated 05-29-24) non_targeted_therapy_dose The dose at which the non-targeted therapeutic agent in question was administered, exclusive of the dosage units.
CDE ID = 2182728 (added 05-29-24) non_targeted_therapy_dose_units The units of measure for the dose at which the non-targeted therapeutic agent in question was administered.
CDE ID = 2321160 (added 05-29-24) non_targeted_therapy_end_date text The date upon which administration of the non-targeted therapy in question ended, expressed as the number of days before or after study enrollment the non-targeted therapy administration ended.
NOT CURRENTLY ASSIGNED ANY CDE >>> The Proposed CDE references age not time relative to study enrollment non_targeted_therapy_frequency The frequency at which the non-targeted therapeutic agent in question was administered.
CDE ID = 2003878 (added 05-29-24) non_targeted_therapy_id A unique identifier of each non-targeted therapy record, used to identify the correct non-targeted therapy records during data updates.
CDE ID = 14822135 (added 05-29-24) non_targeted_therapy_start_date The date upon which administration of the non-targeted therapy in question began, expressed as the number of days before or after study enrollment the non-targeted therapy administration began.
NOT CURRENTLY ASSIGNED ANY CDE >>> The Proposed CDE references age not time relative to study enrollment occupation
CDE ID = 6617540 (added 05-31-24) parent_specimen_id CMB's "Parent Biospecimen ID"
CDE ID = 5581201 (added 06-03-24) parent_specimen_type Acceptable values taken straight from the CMB Catalog Site.
CDE ID = 11253427 (added 06-03-24) person_first_name The first or given name of the person responsible for the conduct of the clinical trial or research project.
CDE ID = 2179589 (updated 05-28-24) person_last_name The last or family name of the person responsible for the conduct of the clinical trial or research project.
CDE ID = 2179591 (updated 05-28-24) person_middle_name The middle name of the person responsible for the conduct of the clinical trial or research project.
CDE ID = 2179590 (updated 05-28-24) person_orcid A persistent unique digital identifier assigned to a principal investigator by the Open Researcher and Contributor ID (ORCID) organization.
CDE ID = 10624734 (updated 05-28-24) primary_cause_of_death
CDE ID = 4783274 (updated 05-31-24) primary_diagnosis_disease_group
CDE ID = 14905532 (added 05-28-24) primary_disease_site
CDE ID = 14883047 (added 05-28-24) program_name
CDE ID = 11444542 (correct as of 05-28-24) program_short_name
CDE ID = 11459801 (correct as of 05-28-24)
This property is used as the key via which child records, e.g. project and/or study/trial records, can be associated with the appropriate program during data loading, and to identify the correct records during data updates. project_name
CDE ID = 11459804 (correct as of 05-28-24) project_short_name
CDE ID = 11459806 (correct as of 05-28-24)
This property is used as the key via which child records, e.g. study/trial, image collection and principal investigator records, can be associated with the appropriate project during data loading, and to identify the correct records during data updates. property_1 text property_2 text property_3 text race
CDE ID = 2192199 (added 05-31-24) radiation_dose The dose at which the radiotherapy in question was administered, exclusive of the dosage units.
NOT CURRENTLY ASSIGNED ANY CDE radiation_dose_units The units of measure for the dose at which the radiotherapy in question was administered.
CDE ID = 13383458 (added 05-29-24) radiation_extent CDE ID = 7063755 (added 05-29-24) radiation_frequency The frequency at which the radiotherapy in question was administered.
CDE ID = 14918782 (added 05-29-24) radiological_procedure The name and/or a brief narrative description of the radiological procedure performed upon the subject.
CDE ID = 6411539 radiological_procedure_anatomical_location The anatomical site or sites subject to the radiological procedure in question.
NOT CURRENTLY ASSIGNED ANY CDE radiological_procedure_id A unique identifier of each radiological procedure record, used to identify the correct radiological procedure record during data updates.
CDE ID = 14822135 (added 05-29-24) radiology_images_available An indicator as to whether any radiology images relating to the subject in question are available.
NOT CURRENTLY ASSIGNED ANY CDE radiology_report_available An indicator as to whether any radiology reports results relating to the subject in question are available.
This is CMB's RADIOLOGY REPORT annotation
CDE ID = 6944764 radiotherapy_end_date The date upon which administration of the radiotherapy in question ended, expressed as the number of days before or after study enrollment the radiotherapy ended.
NOT CURRENTLY ASSIGNED ANY CDE >>> The Proposed CDE references age not time relative to study enrollment radiotherapy_start_date The date upon which administration of the radiotherapy in question began, expressed as the number of days before or after study enrollment the radiotherapy began.
NOT CURRENTLY ASSIGNED ANY CDE >>> The Proposed CDE references age not time relative to study enrollment reported_gender Characteristics of people that are socially constructed, including norms, behaviors, and roles based on their sex. As a social construct, these norms, behaviors, and roles vary from society to society and can change over time.
CDE ID = 14927178 repository_name The name of the image repository within which the image collection can be found, stated in the form of the appropriate acronym.
CDE ID = 14826003 (added 05-28-24) sex CDE ID = 7572817 (updated 05-31-24) snomed_disease_code A 9-digit numerical code for the primary disease with which the subject in question has been diagnosed.
CDE ID = 6642369 snomed_disease_term text
NOT CURRENTLY ASSIGNED ANY CDE specimen_category
CDE ID = 12445832 (updated 06-03-24) specimen_id CMB's "Biospecimen ID"
CDE ID = 6921892 (added 06-03-24)
This property is used as the key via which child records, e.g. data files generated via Oncomine panel analyses, can be associated with the appropriate specimen during data loading, and to identify the correct records during data updates. specimen_type Acceptable values taken straight from the CMB Catalog Site.
CDE ID = 11253427 (added 06-03-24) stage_of_disease The stage of the primary disease with which the subject in question has been diagnosed.
CDE ID = 3440332 (added 05-28-24) study_description A narrative description of the study/trial.
CDE ID = 3444002 (added 05-28-24) study_id Any external identifier by which the study/trial in question is known.
CDE ID = 5054234 (added 05-28-24) study_name
CDE ID = 11459810 (correct as of 05-28-24) study_short_name
CDE ID = 11459812 (correct as of 05-28-24)
This property is used as the key via which child records, e.g. image collection and subject records, can be associated with the appropriate study/trial during data loading, and to identify the correct records during data updates. study_type
CDE ID = 11160683 (correct as of 05-28-24) subject_id The globally unique ID by which any given subject can be unambiguously identified and displayed across studies/trials.
CDE ID = 12220014 (added 05-31-24)
This property is used as the key via which child records, e.g. specimen records, can be associated with the appropriate subject during data loading, and to identify the correct records during data updates. subject_status_id A unique identifier of each subject_status record, used to identify the correct subject_status records during data updates. The value of this property will generally be the same as the value of the subject_id property.
CDE ID = 14822135 (added 05-31-24) surgical_procedure The name and/or a brief narrative description of the surgical procedure performed upon the subject.
CDE ID = 13383457 surgical_procedure_anatomical_location The anatomical site or sites at which the surgical procedure in question was performed.
NOT CURRENTLY ASSIGNED ANY CDE surgical_procedure_findings A narrative description of any significant findings observed during the surgical procedure in question.
NOT CURRENTLY ASSIGNED ANY CDEtext surgical_procedure_id A unique identifier of each surgical procedure record, used to identify the correct surgical procedure therapy records during data updates.
CDE ID = 14822135 (added 05-29-24) surgical_procedure_therapeutic An indication as to whether the surgical procedure in question was performed with therapeutic intent.
NOT CURRENTLY ASSIGNED ANY CDE survival_status
CDE ID = 2847330 (correct as of 05-31-24, but CDE metadata updated) targeted_therapy The name of the therapeutic agent administered to a subject as a targeted therapy, i.e. one that is considered to have enhanced therapeutic effects upon the specific type of cancer with which the subject has been diagnosed, and/or upon that type of cancer specifically within the context of a given subject because of factors such as tumor histology, grade, gene expression and genetic make-up. Notably, a therapeutic agent considered to be and administered as a targeted therapy in one subject based upon the specifics of such characteristics can, conversely, be considered and administered as a non-targeted therapy in another subject, because of differences in his or her type of cancer per se, or the specific context of the cancer in question.
CDE ID = 14913015 (updated 05-29-24) targeted_therapy_dose The dose at which the targeted therapeutic agent in question was administered, exclusive of dosage units.
CDE ID = 2182728 (added 05-29-24) targeted_therapy_dose_units The units of measure for the dose at which the targeted therapeutic agent in question was administered.
CDE ID = 2321160 (added 05-29-24) targeted_therapy_end_date The date upon which administration of the targeted therapy in question ended, expressed as the number of days before or after study enrollment the targeted therapy administration ended.
NOT CURRENTLY ASSIGNED ANY CDE >>> The proposed CDE references age not time relative to study enrollment targeted_therapy_frequency The frequency at which the targeted therapeutic agent in question was administered.
CDE ID = 2003878 (added 05-29-24) targeted_therapy_id A unique identifier of each targeted therapy record, used to identify the correct targeted therapy records during data updates.
CDE ID = 14822135 (added 05-29-24) targeted_therapy_start_date The date upon which administration of the targeted therapy in question began, expressed as the number of days before or after study enrollment the targeted therapy administration began.
NOT CURRENTLY ASSIGNED ANY CDE >>> The Proposed CDE references age not time relative to study enrollment tissue_category Based upon the values in use, this is CMB Catalog's version of caDSR "Tissue Type" aka CTDC "type_of_tissue".
Acceptable values taken straight from the CMB Catalog Site.
CDE ID = 14688604 (added 06-03-24) tumor_grade
CDE ID = 11325685 (correct as of 05-28-24) weight The weight of the subject as of enrollment, measured in kg.
CDE ID = 2179689 (added 05-31-24)