Converts between IMOD files and a micrograph parameter file. More...

#include "mg_processing.h"
#include "mg_img_proc.h"
#include "mg_tomography.h"
#include "rwmg.h"
#include "rwmgIMOD.h"
#include "rwimg.h"
#include "linked_list.h"
#include "utilities.h"
#include "options.h"
#include "timer.h"

Functions
int	write_IMOD_parameters (Bstring &imodfile, Bproject *project)

int	main (int argc, char **argv)

Variables
int	verbose

const char *	use []

Detailed Description

Converts between IMOD files and a micrograph parameter file.

Author: Bernard Heymann

Date: Created: 20070501; Modified: 20180322

Function Documentation

◆ main()

int main	(	int	argc,
		char **	argv
	)

◆ write_IMOD_parameters()

int write_IMOD_parameters	(	Bstring &	imodfile,
		Bproject *	project
	)

Variable Documentation

◆ use

const char* use[]

Initial value:

= {
" ",
"Usage: bmg2imod [options] input.mrc input.xf input.tlt input.xyz",
"----------------------------------------------------------------",
"Converts between IMOD files and a micrograph parameter file.",
" ",
"Actions:",
"-topif                   Flag to convert the image file to multi-image PIF (default not).",
" ",
"Parameters:",
"-verbose 7               Verbosity of output.",
"-sampling 1.5            Sampling (A/pixel).",
" ",
"Output:",
"-output file.star        Output micrograph parameter file.",
"-imod file.xf            Output IMOD parameter files.",
" ",
NULL
}

◆ verbose

int verbose

extern

Functions