bmgconvert.cpp File Reference

Convert between micrograph parameter formats. More...

#include "mg_processing.h"
#include "rwmg.h"
#include "rwmgSTAR.h"
#include "rwmgRELION.h"
#include "rwmgXML.h"
#include "mg_ctf.h"
#include "file_util.h"
#include "linked_list.h"
#include "utilities.h"
#include "options.h"
#include "timer.h"

Macros
#define	DATLINELENGTH   120

Functions
Bproject *	read_project_conv (Bstring *file_list)
int	write_project_conv (Bstring &filename, Bproject *project, FileType type, int flags)
int	read_project_dat (Bstring &filename, Bproject *project)
	Reading micrograph parameters from a DAT file. More...
int	write_project_dat (Bstring &filename, Bproject *project, int flags)
	Writing micrograph parameters to a DAT file. More...
int	read_project_crd (Bstring &filename, Bproject *project)
	Reading micrograph parameters from a CRD file. More...
int	write_project_crd (Bstring &filename, Bproject *project, int flags)
	Writing micrograph parameters to a CRD file. More...
int	project_modify_parameters (Bproject *project, char flags)
	Modifies some micrograph parameters. More...
int	main (int argc, char **argv)

Variables
int	verbose
const char *	use []

Detailed Description

Convert between micrograph parameter formats.

Author

Bernard Heymann

David Belnap

James Conway

Juha Huiskonen

Date

Created: 20061101

Modified: 20220311

Macro Definition Documentation

DATLINELENGTH

#define DATLINELENGTH   120

Function Documentation

main()

int main	(	int	argc,
		char **	argv
	)

project_modify_parameters()

int project_modify_parameters	(	Bproject *	project,
		char	flags
	)

Modifies some micrograph parameters.

Parameters

*project	project structure.
flags	bit 0 = omega 90 flag, bit 1 = mag flag.

Returns

int error code (<0 means failure).

read_project_conv()

Bproject * read_project_conv

(

Bstring *

file_list

)

read_project_crd()

int read_project_crd	(	Bstring &	filename,
		Bproject *	project
	)

Reading micrograph parameters from a CRD file.

Parameters

&filename	file name (or comma-delimited list).
*project	initialized project structure.

Returns

int error code (<0 means failure).

read_project_dat()

int read_project_dat	(	Bstring &	filename,
		Bproject *	project
	)

Reading micrograph parameters from a DAT file.

Parameters

&filename	file name (or comma-delimited list).
*project	initialized project structure.

Returns

int error code (<0 means failure).

write_project_conv()

int write_project_conv	(	Bstring &	filename,
		Bproject *	project,
		FileType	type,
		int	flags
	)

write_project_crd()

int write_project_crd	(	Bstring &	filename,
		Bproject *	project,
		int	flags
	)

Writing micrograph parameters to a CRD file.

Parameters

*filename	file name.
*project	project structure.
flags	write flags to select micrographs.

Returns

int error code (<0 means failure).

write_project_dat()

int write_project_dat	(	Bstring &	filename,
		Bproject *	project,
		int	flags
	)

Writing micrograph parameters to a DAT file.

Parameters

*filename	file name.
*project	project structure.
flags	write flags to select micrographs.

Returns

int error code (<0 means failure).

Variable Documentation

use

const char* use[]

verbose

int verbose

extern