bmodcomp.cpp File Reference

A tool to compare polyhedra. More...

#include "rwmodel.h"
#include "model_select.h"
#include "model_poly.h"
#include "model_compare.h"
#include "model_util.h"
#include "rwimg.h"
#include "utilities.h"
#include "options.h"
#include "timer.h"

Functions
int	main (int argc, char **argv)

Variables
int	verbose
const char *	use []

Detailed Description

A tool to compare polyhedra.

Author

Bernard Heymann

Date

Created: 20080102

Modified: 20190125

Function Documentation

main()

int main	(	int	argc,
		char **	argv
	)

Variable Documentation

use

const char* use[]

Initial value:

= {
" ",
"Usage: bmodcomp [options] in.star",
"---------------------------------",
"Compares models internally or to reference models.",
" ",
"Actions:",
"-all                     Select all models for comparison.",
"-distance                Calculate a distance matrix.",
"-unknown                 Select unknown models for comparison.",
"-closed order,3          Select based on valency (valency,<n>) or polygon order (order,<n>).",
"-consensus 12.5          Calculate a consensus model: components are considered the same if within the given distance.",
" ",
"Parameters:",
"-verbose 7               Verbosity of output.",
" ",
"Input:",
"-parameters parm.star    Molecular parameter file (default atom_prop.star).",
"-reference ref.star      File with reference models.",
" ",
"Output:",
"-output new.star         Output model file.",
"-writereference ref.star Reference output model file.",
"-matrix file.mat         Distance matrix.",
"-image file.map          Distance matrix as an image.",
" ",
NULL
}

verbose

int verbose

extern