emgrand.cpp File Reference

Generate random values for micrograph parameters. More...

#include "mg_random.h"
#include "rwmg.h"
#include "symmetry.h"
#include "utilities.h"
#include "timer.h"
#include "options.h"

Functions
int	main (int argc, char **argv)

Variables
int	verbose
const char *	use []

Detailed Description

Generate random values for micrograph parameters.

Author

Eduardo Sanz-Garcia, David Belnap and Bernard Heymann

Date

Created: 20051011

Modified: 20100128

Function Documentation

main()

int main	(	int	argc,
		char **	argv
	)

Variable Documentation

use

const char* use[]

Initial value:

= {
" ",
"Usage: emgrand [options] input.star [input.star]",
"------------------------------------------------",
"Randomizes particle parameters.",
" ",
"Actions:",
"-randomviews             Replace views with random orientations.",
"-helical                 Replace views with random orientations for a helix.",
"-symmetry C5             Replace views with random symmetry-related orientations.",
"-origins 1.4             Introduce random errors into origins with this standard deviation (pixels).",
"-views 3.1               Introduce random errors into views with this standard deviation (degrees).",
"-defocus 0.3             Introduce random errors into defocus with this standard deviation (um).",
"-magnification 0.1       Introduce random errors into magnifications with this standard deviation (fraction).",
"-setasu C5               Set the views to the asymmetric unit (must agree with -symmetry if used).",
" ",
"Parameters:",
"-verbose 7               Verbosity of output.",
" ",
"Output:",
"-output file.star        Output parameter file name.",
" ",
NULL
}

verbose

int verbose

extern