Library routines to read and write Phylip sequence files. More...

#include "rwPhylip.h"
#include "utilities.h"
#include <fstream>

Functions
int	readPhylip (Bstring &filename, Bmolgroup *molgroup)
	Reads Phylip format sequence files. More...

int	writePhylip (Bstring &filename, Bmolgroup *molgroup)
	Writes Phylip format sequence files. More...

Variables
int	verbose

Detailed Description

Library routines to read and write Phylip sequence files.

Author: Bernard Heymann

Date: Created: 20030308; Modified: 20210423

Function Documentation

◆ readPhylip()

int readPhylip	(	Bstring &	filename,
		Bmolgroup *	molgroup
	)

Reads Phylip format sequence files.

Parameters

&filename	sequence file name.
*molgroup	molecule group.

Returns

int number of molecules read (<0 if reading failed).

Phylip format:
21   1419
WMBEX6    MT------------------------------------------------
P89429    MA------------------------------------------------
P09302    MAEITSLFNNSS--------------------------------------

◆ writePhylip()

int writePhylip	(	Bstring &	filename,
		Bmolgroup *	molgroup
	)

Writes Phylip format sequence files.

Parameters

&filename	sequence file name.
*molgroup	molecule group.

Returns: int number of molecules written (<0 if writing failed).

Variable Documentation

◆ verbose

int verbose

extern