tcltk_bbox.cpp File Reference

A shared object to manage micrograph parameter files in TCL/Tk. More...

#include <tk.h>
#include "tcltk_bbox.h"
#include "tcltk_bimage.h"
#include "mg_img_proc.h"
#include "mg_select.h"
#include "mg_particle_select.h"
#include "mg_pick.h"
#include "mg_ctf.h"
#include "mg_extract.h"
#include "rwmg.h"
#include "linked_list.h"
#include "timer.h"
#include "utilities.h"
#include <sys/stat.h>

Functions
Tcl_Obj *	box_count (Bproject *project, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_count (Bparticle *part, Bbadarea *bad, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_ids (Bparticle *part, Bbadarea *bad, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_location (Bparticle *part, Bbadarea *bad, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_fom (Bparticle *part, Bbadarea *bad, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_fom_min (Bproject *project, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_fom_max (Bproject *project, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_select (Bparticle *part, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_select (Bparticle *part, Bbadarea *bad, Vector3< float > rad, double badrad, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_select_min (Bproject *project, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_select_max (Bproject *project, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_move (Bparticle *part, Bbadarea *bad, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_create (Bmicrograph *mg, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_create (Breconstruction *rec, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_renumber (Bparticle *part, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_delete (Bproject *project, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_delete (Bmicrograph *mg, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_delete (Breconstruction *rec, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_center (Bmicrograph *mg, Breconstruction *rec, Bimage *p, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_update_template (Bmicrograph *mg, Breconstruction *rec, Bimage *p, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_pickcc (Bmicrograph *mg, Breconstruction *rec, Bimage *p, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_pickvar (Bmicrograph *mg, Breconstruction *rec, Bimage *p, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	box_extract (Bmicrograph *mg, Breconstruction *rec, Bimage *p, int objc, Tcl_Obj *CONST objv[])
Tcl_Obj *	do_box (Bproject *project, int objc, Tcl_Obj *CONST objv[])

Variables
int	verbose
Bimage *	imglist
Bimage *	imgtemp

Detailed Description

A shared object to manage micrograph parameter files in TCL/Tk.

Author

Bernard Heymann

Date

Created: 20030813

Modified: 20200512

Function Documentation

box_center()

Tcl_Obj * box_center	(	Bmicrograph *	mg,
		Breconstruction *	rec,
		Bimage *	p,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_count() [1/2]

Tcl_Obj * box_count	(	Bparticle *	part,
		Bbadarea *	bad,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_count() [2/2]

Tcl_Obj * box_count	(	Bproject *	project,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_create() [1/2]

Tcl_Obj * box_create	(	Bmicrograph *	mg,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_create() [2/2]

Tcl_Obj * box_create	(	Breconstruction *	rec,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_delete() [1/3]

Tcl_Obj * box_delete	(	Bmicrograph *	mg,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_delete() [2/3]

Tcl_Obj * box_delete	(	Bproject *	project,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_delete() [3/3]

Tcl_Obj * box_delete	(	Breconstruction *	rec,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_extract()

Tcl_Obj * box_extract	(	Bmicrograph *	mg,
		Breconstruction *	rec,
		Bimage *	p,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_fom()

Tcl_Obj * box_fom	(	Bparticle *	part,
		Bbadarea *	bad,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_fom_max()

Tcl_Obj * box_fom_max	(	Bproject *	project,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_fom_min()

Tcl_Obj * box_fom_min	(	Bproject *	project,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_ids()

Tcl_Obj * box_ids	(	Bparticle *	part,
		Bbadarea *	bad,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_location()

Tcl_Obj * box_location	(	Bparticle *	part,
		Bbadarea *	bad,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_move()

Tcl_Obj * box_move	(	Bparticle *	part,
		Bbadarea *	bad,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_pickcc()

Tcl_Obj * box_pickcc	(	Bmicrograph *	mg,
		Breconstruction *	rec,
		Bimage *	p,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_pickvar()

Tcl_Obj * box_pickvar	(	Bmicrograph *	mg,
		Breconstruction *	rec,
		Bimage *	p,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_renumber()

Tcl_Obj * box_renumber	(	Bparticle *	part,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_select() [1/2]

Tcl_Obj * box_select	(	Bparticle *	part,
		Bbadarea *	bad,
		Vector3< float >	rad,
		double	badrad,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_select() [2/2]

Tcl_Obj * box_select	(	Bparticle *	part,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_select_max()

Tcl_Obj * box_select_max	(	Bproject *	project,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_select_min()

Tcl_Obj * box_select_min	(	Bproject *	project,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

box_update_template()

Tcl_Obj * box_update_template	(	Bmicrograph *	mg,
		Breconstruction *	rec,
		Bimage *	p,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

do_box()

Tcl_Obj * do_box	(	Bproject *	project,
		int	objc,
		Tcl_Obj *CONST	objv[]
	)

Variable Documentation

imglist

Bimage* imglist

extern

imgtemp

Bimage* imgtemp

extern

verbose

int verbose

extern