: Public Class
Created: 10/17/2008 1:09:29 AM
Modified: 3/26/2015 6:04:06 PM
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DEFINITION:<br /></p><p>An annotation assigned to a defined amino acid physical location.   <br /></p><p><br /></p><p>EXAMPLE(S):<br /></p><p>alpha helices, glycosylation sites, DNA binding domains<br /></p><p><br /></p><p>OTHER NAME(S):<br /></p><p><br /></p><p>NOTE(S):<br /></p>
Attribute
Public CD
  typeCode
Details:
Map:LSDAM=AminoAcidSequenceFeature.typeCode
Map:LSDAMv2.2.3Plus=AminoAcidSequenceFeature.typeCode
Notes: DEFINITION:#lt;br /#gt;#lt;/p#gt;#lt;p#gt;A coded value that specifies a group of amino acids within a protein that confer certain characteristics upon that protein, and may be important for its overall function.  #lt;br /#gt;#lt;/p#gt;#lt;p#gt;#lt;br /#gt;#lt;/p#gt;#lt;p#gt;EXAMPLE(S):#lt;br /#gt;#lt;/p#gt;#lt;p#gt;glycosylation site, binding site, site of post-translational modification#lt;br /#gt;#lt;/p#gt;#lt;p#gt;#lt;br /#gt;#lt;/p#gt;#lt;p#gt;OTHER NAME(S):#lt;br /#gt;#lt;/p#gt;#lt;p#gt;#lt;br /#gt;#lt;/p#gt;#lt;p#gt;NOTE(S):#lt;br /#gt;#lt;/p#gt;#lt;p#gt;[Glycosylation Site:C16643, C37901; Binding Site:C13671]#lt;br /#gt;#lt;/p#gt;
Element Source Role Target Role
AminoAcidPhysicalLocation
Class   		Name: includedAminoAcidSequenceFeature
  		Name: includingAminoAcidPhysicalLocation
 
Details:
DESCRIPTION:<br /></p><p>Each AminoAcidSequenceFeature always is included in one or more AminoAcidPhysicalLocation. Each AminoAcidPhysicalLocation might include one or more AminoAcidSequenceFeature.<br /></p><p><br /></p><p>DEFINITION:<br /></p><p><br /></p><p>EXAMPLE(S):<br /></p><p><br /></p><p>OTHER NAME(S):<br /></p><p><br /></p><p>NOTE(S):<br /></p>
Element Source Role Target Role
MolecularSequenceAnnotation
Class   		Name: reportingMolecularSequenceAnnotation
  		Name: reportedAminoAcidSequenceFeature
 
Details:
DESCRIPTION:<br /></p><p>Each MolecularSequenceAnnotation might report one or more AminoAcidSequenceFeature.  Each AminoAcidSequenceFeature might be reported by one or more MolecularSequenceAnnotation.<br /></p><p><br /></p><p>DEFINITION:<br /></p><p><br /></p><p>EXAMPLE(S):<br /></p><p><br /></p><p>OTHER NAME(S):<br /></p><p><br /></p><p>NOTE(S):<br /></p>
Tag Value
Map:LSDAM AminoAcidSequenceFeature
Details:
 
Map:LSDAMv2.2.3Plus AminoAcidSequenceFeature
Details: