: Public <<DEPRECATED>> Class
Created: 10/22/2008 2:50:52 PM
Modified: 7/3/2019 4:52:18 PM
Project:
Advanced:
DEFINITION:<br/>'A series of actions among molecules in or associated with a cell that leads to a certain product or a change in a cell. Such a pathway can trigger the assembly of new molecules, such as a fat or protein. Pathways can also turn genes on and off, or spur a cell to move. [Adapted from: http://www.genome.gov/27530687]<br/><br/>EXAMPLE(S): <br/>Notch signaling pathway<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>
Attribute
Public ID
  identifier
Details:
Map:LSDAMv2.2.3Plus=PathwayIdentifier.identifier
Notes: DEFINITION:<br/>A unique symbol that establishes the identity of the pathway.<br/><br/>EXAMPLE(S):<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>
Public ST
  name
Details:
Map:LSDAMv2.2.3Plus=Pathway.name
Notes: DEFINITION:<br/>A non-unique textual identifier for the pathway.<br/><br/>EXAMPLE(S):<br/>Notch signaling pathway<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>
Public ST
  description
Details:
Map:LSDAMv2.2.3Plus=Pathway.description
Notes: DEFINITION:<br/>The textual summary or explanation of the pathway.<br/><br/>EXAMPLE(S):<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>
Public SC
  type
Details:
Map:LSDAMv2.2.3Plus=Pathway.type
Notes: DEFINITION:<br/>A generalized classification of the pathway.<br/><br/>EXAMPLE(S):<br/>metabolic pathway, signaling pathway<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>
Element Source Role Target Role
Gene
Class   		Name: involvingPathway
  		Name: involvedGene
 
Details:
DESCRIPTION:<br/>Each Pathway might involve one or more Gene. Each Gene might be involved in one or more Pathway.<br/><br/>DEFINITION:<br/><br/>EXAMPLE(S):<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>
BiologicEntityClassification
Class   		Name: includedPathway
  		Name: includingBiologicEntityClassification
 
Details:
DESCRIPTION:<br/>Each Pathway might be included by one or more BiologicEntityClassification. Each BiologicEntityClassification might include one or more Pathway.<br/><br/>DEFINITION:<br/><br/>EXAMPLE(S):<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>
Protein
Class   		Name: involvingPathway
  		Name: involvedProtein
 
Details:
DESCRIPTION:<br/>Each Pathway might involve one or more Protein. Each Protein might be involved in one or more Pathway. <br/>  <br/>DEFINITION:<br/><br/>EXAMPLE(S):<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>
Tag Value
Map:LSDAMv2.2.3Plus Pathway
Details: