: Public Class
Created: |
7/24/2009 1:26:31 PM |
Modified: |
8/14/2018 1:59:03 PM |
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Project: |
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Author: |
BRIDG SCC |
Version: |
1.0 |
Phase: |
1.0 |
Status: |
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Complexity: |
Easy |
Difficulty: |
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Priority: |
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Multiplicity: |
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Advanced: |
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UUID: |
{0AB9A6AF-A467-4106-B8AF-DAE23CBBFE54} |
Appears In: |
UML-Based Comprehensive BRIDG Model Diagram, View BSP: Biospecimen, View EX: Experiment, View IM: Imaging, Imaging Acquisition, View PR: Protocol Representation, SDTM IG v3.1.3, SDTM Exposure (EX) Domain, SDTM IG v3.2, Oncology & Imaging, Surveillance, Epidemiology & End Results (SEER), Anatomic Pathology Structured Report (APSR), Common Data Model Harmonization (CDMH), National Biomedical Imaging Archive (NBIA), National Marrow Donor Program (NMDP) |
DEFINITION:<br/>An activity defined at a global library level that is an action whose immediate and primary intention is the alteration of the physical condition of the subject.<br/><br/>EXAMPLE(S):<br/>Procedures may involve the disruption of some body surface (e.g. an incision in a surgical procedure).<br/><br/>Conservative procedures such as reduction of a luxated joint, including physiotherapy such as chiropractic treatment, massage, balneotherapy, acupuncture, shiatsu.<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>The documented use cases from life sciences are limited to procedure and observations. Use cases for other kinds of activities in life sciences are needed to support this relationship at Activity level. In the next release, this relationship will have to be re-assessed. <br/>
- Attributes
- Associations To
- Tagged Values
- Constraints
- Other Links
Attribute |
Public ST nameCodeModifiedText
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Details:
Alias: |
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Initial: |
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Stereotype: |
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Ordered: |
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Range: |
Range:0 to 1 |
Transient: |
False |
Derived: |
False |
IsID: |
False |
Map:BRIDGSCC=Model Integrity Map:PGx v1.0=BE.BEMODIFY
Notes:
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DEFINITION:<br/>A character string that is a revision of the original text of the procedure to enable the coding of the text.<br/><br/>EXAMPLE(S):<br/>If the original text is "message", the nameCodeModifiedText could be set to "massage", so that the text can be successfully coded.<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>In the context of BRIDG, text modification occurs a single time for a given instance of originalText.<br/>
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Public CD methodCode
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Details:
Alias: |
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Initial: |
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Stereotype: |
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Ordered: |
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Range: |
Range:0 to 1 |
Transient: |
False |
Derived: |
False |
IsID: |
False |
Map:BRIDGv2.2=PlannedProcedure.methodCode Map:CTRPv3.8=PlannedProcedure.methodCode Map:CTRv1.0=DefinedProcedure.methodCode Map:FDA HL7 SD SD DSTU2012=PlannedSubjectActivity/Procedure.methodCode Map:HCTv1.0=CDE 2748795:Therapies.What malignant cell removal method was used to treat the product? Map:HCTv1.0=CDE 2750692:Graft Manipulation.Specify the ex vivo graft manipulation other than for RBC removal or volume reduction: Map:HCTv1.0=CDE 2750679:Graft Manipulation.What was the method of ex vivo graft manipulation other than for RBC removal or volume reduction? Map:HCTv1.0=CDE 2774532:Techniques.Specify the other erythrocyte reduced methods Map:HCTv1.0=CDE 2774742:Techniques.Specify the other T-cell depletion method: Map:LSDAMv2.2.3Plus=InvivoCharacterization.procedureCode Map:LSDAMv2.2.3Plus=DefinedSpecimenFixed.fixationType Map:LSDAMv2.2.3Plus=InvitroCharacterization.assayType
Notes:
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DEFINITION:<br/>A coded value specifying the technique that is used for the procedure.<br/><br/>EXAMPLE(S):<br/>Finger stick, veni puncture, Abdominal/ ascites effusion, Biopsy, Bronchial alveolar lavage (BAL) (for specimen collection)<br/><br/>Capillary electrophoresis and HPLC (for In Vitro Characterization)<br/><br/>Cell counting, flow cytometry (for In Vivo Characterization)<br/><br/>Open, laparoscopic (for cholecystectomy)<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>
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Public CD targetAnatomicSiteCode
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Details:
Alias: |
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Initial: |
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Stereotype: |
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Ordered: |
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Range: |
Range:0 to 1 |
Transient: |
False |
Derived: |
False |
IsID: |
False |
Map:BRIDGv2.2=PlannedProcedure.targetSiteCode Map:CTRPv3.8=PlannedProcedure.targetSiteCode Map:CTRv1.0=DefinedProcedure.targetAnatomicSiteCode Map:FDA HL7 SD SD DSTU2012=PlannedSubjectActivity/Procedure.TargetSiteCode Map:LSDAMv2.2.3Plus=DefinedProcedure.targetAnatomicSiteCode Map:PGx v1.0=BE.BELOC Map:SDTM IGv3.1.1=EX.EXLOC Map:SDTM IGv3.1.1=VS.VSLOC Map:SDTM IGv3.1.1=PE.PELOC Map:SDTM IGv3.1.1=AE.AELOC Map:SDTM IGv3.2=ED.EDLOC
Notes:
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DEFINITION:<br/>A coded value specifying the anatomic location that is the focus of a procedure.<br/><br/>EXAMPLE(S):<br/>Kidney for a nephrectomy<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>Multiple contiguous sites within the same organ system may be referenced.<br/><br/>Sources that capture anatomic site and laterality separately should map both to this attribute. For implementation models based on BRIDG where site and laterality are captured separately, you may wish to capture both concepts as a post-coordinated code structure or as multiple code repetitions.<br/>
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Public CD targetAnatomicSiteLateralityCode
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Details:
Alias: |
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Initial: |
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Stereotype: |
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Ordered: |
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Range: |
Range:0 to 1 |
Transient: |
False |
Derived: |
False |
IsID: |
False |
Map:CTRv1.0=DefinedProcedure.targetAnatomicSiteLateralityCode Map:PGx v1.0=BE.BELOC Map:SDTM IGv3.1.1=PE.PELOC Map:SDTM IGv3.1.1=EX.EXLOC Map:SDTM IGv3.1.1=AE.AELOC Map:SDTM IGv3.1.1=VS.VSLOC Map:SDTM IGv3.2=ED.EDLAT
Notes:
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DEFINITION:<br/>A coded value specifying the side of the body (or a paired organ) that is a target site for a procedure. <br/><br/>EXAMPLE(S):<br/>bilateral, left, right<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>This attribute was deprecated in BRIDG 3.1 but undeprecated in 4.0 since source use cases for separate laterality include SDTM and CTOM. This change ensures that users of the BRIDG model are not bound to a particular kind of vocabulary, such as pre- or post-coordinated vocabularies. Collapsing laterality into the target site code is an implementation option.<br/>
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Public CD approachAnatomicSiteCode
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Details:
Alias: |
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Initial: |
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Stereotype: |
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Ordered: |
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Range: |
Range:0 to 1 |
Transient: |
False |
Derived: |
False |
IsID: |
False |
Map:BRIDGv2.2=PlannedProcedure.approachSiteCode Map:CTRv1.0=DefinedProcedure.approachAnatomicSiteCode Map:FDA HL7 SD SD DSTU2012=PlannedSubjectActivity/Procedure.approachSiteCode Map:FDA HL7 SD SD DSTU2012=PlannedSubjectActivity/SubstanceAdministration.approachSiteCode Map:LSDAMv2.2.3Plus=DefinedProcedure.approachAnatomicSiteCode Map:SDTM IGv3.1.1=PE.PELOC Map:SDTM IGv3.1.1=VS.VSLOC Map:SDTM IGv3.1.1=AE.AELOC Map:SDTM IGv3.1.1=EX.EXLOC
Notes:
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DEFINITION:<br/>A coded value specifying the anatomic location or access point for a procedure.<br/><br/>EXAMPLE(S):<br/>Arm for an injection<br/>Trans-abdominal for a nephrectomy<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>Sources that capture anatomic site and laterality separately should map both to this attribute. For implementation models based on BRIDG where site and laterality are captured separately, you may wish to capture both concepts as a post-coordinated code structure or as multiple code repetitions.<br/>
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Public CD approachAnatomicSiteLateralityCode
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Details:
Alias: |
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Initial: |
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Stereotype: |
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Ordered: |
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Range: |
Range:0 to 1 |
Transient: |
False |
Derived: |
False |
IsID: |
False |
Map:CTRv1.0=DefinedProcedure.approachAnatomicSiteLateralityCode Map:LSDAMv2.2.3Plus=DefinedProcedure.approachAnatomicSiteLateralityCode Map:SDTM IGv3.1.1=EX.EXLOC Map:SDTM IGv3.1.1=VS.VSLOC Map:SDTM IGv3.1.1=PE.PELOC Map:SDTM IGv3.1.1=AE.AELOC
Notes:
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DEFINITION:<br/>A coded value specifying the side of the body (or a paired organ) that is an access point for a procedure. <br/><br/>EXAMPLE(S):<br/>bilateral, left, right<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>This attribute was deprecated in BRIDG 3.1 but undeprecated in 4.0 since source use cases for separate laterality include SDTM and CTOM. This change ensures that users of the BRIDG model are not bound to a particular kind of vocabulary, such as pre- or post-coordinated vocabularies. Collapsing laterality into the target site code is an implementation option.<br/>
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Public DSET<CR> additionalQualifierCode
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Details:
Alias: |
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Initial: |
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Stereotype: |
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Ordered: |
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Range: |
Range:0 to * |
Transient: |
False |
Derived: |
False |
IsID: |
False |
Map:APSRv2.1=SB: Procedure Steps Section - hl7:ClinicalDocument > hl7:component > hl7:structuredBody > hl7:component [Proc Steps] > hl7:section > hl7:entry > hl7:procedure > hl7:code > hl7:qualifier Map:APSRv2.1=SB: Procedure Steps Section - hl7:ClinicalDocument > hl7:component > hl7:structuredBody > hl7:component [Proc Steps] > hl7:section > hl7:entry > hl7:procedure > hl7:code > hl7:qualifier > hl7:value > @nullFlavor Map:APSRv2.1=SB: Procedure Steps Section - hl7:ClinicalDocument > hl7:component > hl7:structuredBody > hl7:component [Proc Steps] > hl7:section > hl7:entry > hl7:procedure > hl7:code > hl7:qualifier > hl7:value Map:APSRv2.1=SB: Procedure Steps Section - hl7:ClinicalDocument > hl7:component > hl7:structuredBody > hl7:component [Proc Steps] > hl7:section > hl7:entry > hl7:procedure > hl7:code > hl7:qualifier > hl7:name > @displayName Map:APSRv2.1=SB: Procedure Steps Section - hl7:ClinicalDocument > hl7:component > hl7:structuredBody > hl7:component [Proc Steps] > hl7:section > hl7:entry > hl7:procedure > hl7:code > hl7:qualifier > hl7:name > @codeSystem Map:APSRv2.1=SB: Procedure Steps Section - hl7:ClinicalDocument > hl7:component > hl7:structuredBody > hl7:component [Proc Steps] > hl7:section > hl7:entry > hl7:procedure > hl7:code > hl7:qualifier > hl7:name > @code Map:APSRv2.1=SB: Procedure Steps Section - hl7:ClinicalDocument > hl7:component > hl7:structuredBody > hl7:component [Proc Steps] > hl7:section > hl7:entry > hl7:procedure > hl7:code > hl7:qualifier > hl7:name
Notes:
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DEFINITION:<br/>A coded value specifying a supplemental characterization of the procedure.<br/><br/>EXAMPLE(S):<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>For APSR, this is used only in staining and other procedures without values in SCT or LOINC or DICOM vocabulary, e.g. immune stains. This attribute ought not to be used if there are dedicated attributes for that purpose in this class.<br/>
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Public CD targetAnatomicSiteDirectionalityCode
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Details:
Alias: |
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Initial: |
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Stereotype: |
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Ordered: |
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Range: |
Range:0 to 1 |
Transient: |
False |
Derived: |
False |
IsID: |
False |
Map:SDTM IGv3.1.2=EC.ECDIR
Notes:
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DEFINITION:<br/>A coded value specifying the directional portion of the anatomic site that is a target site for a procedure. <br/><br/>EXAMPLE(S):<br/>upper, interior<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/>This attribute complements the target anatomic site code and target anatomic site laterality code.<br/>
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Element |
Source Role |
Target Role |
Product
Class
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Name: usingDefinedProcedure
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Name: usedProduct
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 Details:
DESCRIPTION:<br/>Each DefinedProcedure might use one or more Product. Each Product might be used during one or more DefinedProcedure.<br/><br/>DEFINITION:<br/><br/>EXAMPLE(S):<br/><br/>OTHER NAME(S):<br/><br/>NOTE(S):<br/><br/>
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Tag |
Value |
Map:CDMHv1.0 |
DefinedProcedure |
 Details:
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Map:CTRPv3.8 |
PlannedProcedure |
 Details:
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Map:CTRR |
Intervention Name |
 Details:
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Map:CTRRr3 |
DefinedProcedure |
 Details:
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Map:CTRv1.0 |
DefinedProcedure |
 Details:
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Map:LSDAMv2.2.3Plus |
DefinedProcedure |
 Details:
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Constraint |
Type |
Status |
use actualIndicator Qualifier |
Invariant |
Approved |
 Details:
Only Product with actualIndicator = “false” is valid.<br/>
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use Association Set Qualifier |
Invariant |
Approved |
 Details:
The association from ExperimentalActivityItem is only valid if the DefinedProcedure is occurring in the context of an Experiment or a SpecimenProcessing project, and in such case the association to Product is not valid.<br/>
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Object |
Type |
Connection |
Direction |
Notes |
DefinedSubstanceAdministration |
Class |
Generalization |
From |
DESCRIPTION:
Each DefinedSubstanceAdministration always specializes one DefinedProcedure. Each DefinedProcedure might be specialized by one DefinedSubstanceAdministration.
DEFINITION:
EXAMPLE(S):
OTHER NAME(S):
NOTE(S):
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DefinedActivity |
Class |
Generalization |
To |
DESCRIPTION:
Each DefinedProcedure always specializes one DefinedActivity. Each DefinedActivity might be specialized by one DefinedProcedure.
DEFINITION:
EXAMPLE(S):
OTHER NAME(S):
NOTE(S):
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DefinedSpecimenCollection |
Class |
Generalization |
From |
DESCRIPTION:
Each DefinedSpecimenCollection always specializes one DefinedProcedure. Each DefinedProcedure might be specialized by one DefinedSpecimenCollection.
DEFINITION:
EXAMPLE(S):
OTHER NAME(S):
NOTE(S):
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DefinedMaterialProcessStep |
Class |
Generalization |
From |
DESCRIPTION:
Each DefinedMaterialProcessStep always specializes one DefinedProcedure. Each DefinedProcedure might be specialized by one DefinedMaterialProcessStep.
DEFINITION:
EXAMPLE(S):
OTHER NAME(S):
NOTE(S):
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