baberr.cpp File Reference

Program to generate images from aberration weights and analyze them. More...

#include "rwimg.h"
#include "rwPostScript.h"
#include "rwmg.h"
#include "mg_ctf.h"
#include "mg_ctf_fit.h"
#include "simplex.h"
#include "utilities.h"
#include "options.h"
#include "timer.h"
#include "use_ctf.inc"
#include "ctf.inc"

Functions
int	weights_add (map< pair< long, long >, double > &weights, vector< double > v, int flag)
int	weights_add (map< pair< long, long >, double > &weights, string s, int flag)
map< pair< long, long >, double >	convert_zernike_weights (map< pair< long, long >, double > &weights)
map< pair< long, long >, double >	convert_to_zernike_weights (map< pair< long, long >, double > &weights)
vector< Vector3< double > >	shifts_from_file (Bstring &shiftfile)
int	aberration_show (map< string, CTFparam > &cpa)
int	img_ewald_sphere (Bimage *p, CTFparam &cp, double t)
	Imposes an Ewald sphere weighting on a 3D frequency space volume. More...
int	main (int argc, char **argv)

Variables
int	verbose
const char *	use []

Detailed Description

Program to generate images from aberration weights and analyze them.

Author

Bernard Heymann

Date

Created: 20220106

Modified: 20221212

Function Documentation

aberration_show()

int aberration_show

(

map< string, CTFparam > &

cpa

)

convert_to_zernike_weights()

map< pair< long, long >, double > convert_to_zernike_weights

(

map< pair< long, long >, double > &

weights

)

convert_zernike_weights()

map< pair< long, long >, double > convert_zernike_weights

(

map< pair< long, long >, double > &

weights

)

img_ewald_sphere()

int img_ewald_sphere	(	Bimage *	p,
		CTFparam &	cp,
		double	t
	)

Imposes an Ewald sphere weighting on a 3D frequency space volume.

Parameters

*p	frequency space 3D volume.
cp	wavelength.
t	thickness.

Returns

int 0.

main()

int main	(	int	argc,
		char **	argv
	)

shifts_from_file()

vector< Vector3< double > > shifts_from_file

(

Bstring &

shiftfile

)

weights_add() [1/2]

int weights_add	(	map< pair< long, long >, double > &	weights,
		string	s,
		int	flag
	)

weights_add() [2/2]

int weights_add	(	map< pair< long, long >, double > &	weights,
		vector< double >	v,
		int	flag
	)

Variable Documentation

use

const char* use[]

verbose

int verbose

extern