rwSUPRIM.h File Reference

Header file for reading and writing SUPRIM files. More...

#include "rwimg.h"

Classes
union	REG
struct	SUPRIMhead

Macros
#define	F_AVG   0
#define	BACKGROUND   0
#define	ANG_SAMP   1
#define	RAD_SAMP   2
#define	O_ROW_SZ   3
#define	O_COL_SZ   4
#define	ROW_ORG   5
#define	COL_ORG   6
#define	MASK_RAD   7
#define	F_NOTE_R   8
#define	F_NOTE_I   9
#define	SAMP_DIST   10
#define	NSLICES   11
#define	ENL_BP   12
#define	X_FMAX   12
#define	THE_BP   13
#define	PHI_BP   14
#define	FOUR_TR_CEN   15
#define	GSBAR   15
#define	X_NIMA   16
#define	SYMP2   17
#define	X_NPIX   17
#define	X_NCLU   18
#define	X_NCTR   19
#define	X_NAME   20
#define	X_LNAM   21
#define	X_NTRM   21
#define	X_NFAC   22
#define	X_NTYP   23
#define	FRTHDIM   24
#define	X_NIMI   26
#define	X_UFAC   27
#define	X_WALL   28
#define	SLICE_ORG   29
#define	NUM_POLYS   31
#define	X_FBEG   32
#define	PSI_BP   40
#define	X_TRP   70
#define	R_ANGX   81
#define	R_ANGY   82
#define	R_ANGZ   83
#define	R_NPROJ   84
#define	XGLOB   90
#define	YGLOB   91
#define	ROTGLOB   92
#define	XX_CELL   93
#define	XY_CELL   94
#define	YX_CELL   95
#define	YY_CELL   96
#define	IR_WINID   97
#define	O_SLICE_SZ   98
#define	CALIB   99
#define	NAV   100
#define	SUPRIMSIZE   548
#define	MAXREG   128

Functions
int	readSUPRIM (Bimage *p, int readdata)
	Reading a SUPRIM map image file format. A 3D image format used in electron microscopy. Header size: 36 bytes basic fields 512 bytes additional fields called "registers" up to 1024 bytes of "trace" records File format extensions: .spm, .sup Byte order determination: Version and third dimension values must be less than 256*256. Data types: 1 = byte, 2 = float, 3 = complex float, 4 = run-length-encoded float, 5 = short, 6 = RGB, 7 = int, 8 = double. Transform type: Standard. More...
int	writeSUPRIM (Bimage *p)
	Writing a SUPRIM map image file format. A 3D image format used in electron microscopy. More...

Detailed Description

Header file for reading and writing SUPRIM files.

Author

Bernard Heymann

Date

Created: 19990930

Modified: 20050705

Format: 3D image file format for the SUPRIM package

Macro Definition Documentation

ANG_SAMP

#define ANG_SAMP   1

BACKGROUND

#define BACKGROUND   0

CALIB

#define CALIB   99

COL_ORG

#define COL_ORG   6

ENL_BP

#define ENL_BP   12

F_AVG

#define F_AVG   0

F_NOTE_I

#define F_NOTE_I   9

F_NOTE_R

#define F_NOTE_R   8

FOUR_TR_CEN

#define FOUR_TR_CEN   15

FRTHDIM

#define FRTHDIM   24

GSBAR

#define GSBAR   15

IR_WINID

#define IR_WINID   97

MASK_RAD

#define MASK_RAD   7

MAXREG

#define MAXREG   128

NAV

#define NAV   100

NSLICES

#define NSLICES   11

NUM_POLYS

#define NUM_POLYS   31

O_COL_SZ

#define O_COL_SZ   4

O_ROW_SZ

#define O_ROW_SZ   3

O_SLICE_SZ

#define O_SLICE_SZ   98

PHI_BP

#define PHI_BP   14

PSI_BP

#define PSI_BP   40

R_ANGX

#define R_ANGX   81

R_ANGY

#define R_ANGY   82

R_ANGZ

#define R_ANGZ   83

R_NPROJ

#define R_NPROJ   84

RAD_SAMP

#define RAD_SAMP   2

ROTGLOB

#define ROTGLOB   92

ROW_ORG

#define ROW_ORG   5

SAMP_DIST

#define SAMP_DIST   10

SLICE_ORG

#define SLICE_ORG   29

SUPRIMSIZE

#define SUPRIMSIZE   548

SYMP2

#define SYMP2   17

THE_BP

#define THE_BP   13

X_FBEG

#define X_FBEG   32

X_FMAX

#define X_FMAX   12

X_LNAM

#define X_LNAM   21

X_NAME

#define X_NAME   20

X_NCLU

#define X_NCLU   18

X_NCTR

#define X_NCTR   19

X_NFAC

#define X_NFAC   22

X_NIMA

#define X_NIMA   16

X_NIMI

#define X_NIMI   26

X_NPIX

#define X_NPIX   17

X_NTRM

#define X_NTRM   21

X_NTYP

#define X_NTYP   23

X_TRP

#define X_TRP   70

X_UFAC

#define X_UFAC   27

X_WALL

#define X_WALL   28

XGLOB

#define XGLOB   90

XX_CELL

#define XX_CELL   93

XY_CELL

#define XY_CELL   94

YGLOB

#define YGLOB   91

YX_CELL

#define YX_CELL   95

YY_CELL

#define YY_CELL   96

Function Documentation

readSUPRIM()

int readSUPRIM	(	Bimage *	p,
		int	readdata
	)

Reading a SUPRIM map image file format. A 3D image format used in electron microscopy. Header size: 36 bytes basic fields 512 bytes additional fields called "registers" up to 1024 bytes of "trace" records File format extensions: .spm, .sup Byte order determination: Version and third dimension values must be less than 256*256. Data types: 1 = byte, 2 = float, 3 = complex float, 4 = run-length-encoded float, 5 = short, 6 = RGB, 7 = int, 8 = double. Transform type: Standard.

Parameters

*p	the image structure.
readdata	flag to activate reading of image data.

Returns

int error code (<0 means failure).

writeSUPRIM()

int writeSUPRIM

(

Bimage *

p

)

Writing a SUPRIM map image file format. A 3D image format used in electron microscopy.

Parameters

*p	the image structure.

Returns

int error code (<0 means failure).