: Public Class
Created: 10/16/2008 11:57:12 PM
Modified: 3/25/2015 4:09:55 PM
Project:
Advanced:
DEFINITION: <br /></p><p>A representation of a linear arrangement of organic compounds containing amino (-NH2) and carboxyl (-COOH) groups.<br /></p><p><br /></p><p>EXAMPLE(S):  <br /></p><p>the sequence of TP53 protein, the first 20 residues of a BRCA1 protein. <br /></p><p><br /></p><p>OTHER NAME(S):<br /></p><p><br /></p><p>NOTE(S):<br /></p>
Element Source Role Target Role
Protein
Class  
Name: representedProtein
 
Name: representingAminoAcidSequence
 
Details:
DESCRIPTION:<br /></p><p>Each Protein might be represented by one or more AminoAcidSequence.  Each AminoAcidSequence might represent one or more Protein.<br /></p><p><br /></p><p>DEFINITION:<br /></p><p><br /></p><p>EXAMPLE(S):<br /></p><p><br /></p><p>OTHER NAME(S):<br /></p><p><br /></p><p>NOTE(S):<br /></p>
NucleicAcidPhysicalLocation
Class  
Name: translatedNucleaicAcidPhysicalLocation
 
Name: translatingAminoAcidSequence
 
Details:
DESCRIPTION:<br /></p><p>Each NucleicAcidPhysicalLocation might be translated to one AminoAcidSequence. Each AminoAcidSequence always is translated from one or more NucleicAcidPhysicalLocation.<br /></p><p><br /></p><p>DEFINITION:<br /></p><p><br /></p><p>EXAMPLE(S):<br /></p><p><br /></p><p>OTHER NAME(S):<br /></p><p><br /></p><p>NOTE(S):<br /></p>
AminoAcidPhysicalLocation
Class  
Name: includingAminoAcidPhysicalLocation
 
Name: includedAminoAcidSequence
 
Details:
DESCRIPTION:<br /></p><p>Each AminoAcidPhysicalLocation always includes one AminoAcidSequence. Each AminoAcidSequence might be included in one or more AminoAcidPhysicalLocation. <br /></p><p><br /></p><p>DEFINITION:<br /></p><p><br /></p><p>EXAMPLE(S):<br /></p><p><br /></p><p>OTHER NAME(S):<br /></p><p><br /></p><p>NOTE(S):<br /></p>
Tag Value
Map:LSDAM AminoAcidSequence
Details:
 
Map:LSDAMv2.2.3Plus AminoAcidSequence
Details:
 
Object Type Connection Direction Notes
MolecularSequence Class Generalization To DESCRIPTION: Each AminoAcidSequence always specializes one MolecularSequence. Each MolecularSequence might be specialized by one AminoAcidSequence. DEFINITION: EXAMPLE(S): OTHER NAME(S): NOTE(S):